Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0034 ATGGAGAAGCCCCCACTGAAGCGGCGGGCAGTCGCGGACGAGAAAGCCGAAACTGCCTTCAAGCAGGCTAAGCTTCCGGTGAATCCCGGAGCTTCGTGATTCCTTCGCAAACCTTTGGTTGAAACCGCCGCCCATCAGCCCCCGCTTGTCTTCTATTTCGAGTCAATGAACCCTCTGTCTCAGAAGGGAATAGCTGAAGCTAGTAGAATGCATGATCTTAAGACCCCTTTGTTGCAGACTCCACAAGATGCCACGCTCAGGGAAGTTAAGTTTAGAATACAAGATATTACTTGTGCATCCTGTGTAAATTCAATAGAATCTGTGGTTGGAAACCTTGATGGAGTTAATGGTGTTATGGTGTCAGCAATTGATGGCAAAGCTACAGTCAAATATGTGCCAAAGCTCATTAGTGTCAAGAAAATAAAGGAAACTGTAGAAGAAGCAGGTTTTAAAGTTCACGAGCTTTCAGAGCAAGACATATCAGTATGTAAGGTTAGGATTAAAGGAATGGCGTGCACTAGCTGCTCTGAATCTGTTGAGCGTGCTCTTCAAATGGTTGATGGTGTGAAAAAAGCAGCAGTGGGCCTGGCTTTAGGAGAAGCAAAAGTGCATTTTGATCCTAATCTTACTGATACAAACAAAATAATTGAAGCAATAGAAGATGCTGGCTTTGGAGTGGATCTCATTAGCTCGGGGACTGATGTGAACAAAGTGCATCTAAGACTTGAAGGACTTGATTCTCCAGAGGATGTTAATGTTGTAATGTCATCTCTTGAATTAGCTGAAGGTGTAAATCATGTTGAGATGGACTTAACAGAACGTAAAGTTACGGTTACCTATGATCCGGATGTTACAGGTCCCAGATCTCTTATACAGTGCATTCAAGCAGTTGCTCATGGCCCCAGTGGATATCATGCAACCTTGTACTCTCCTTCAAGACAAAGAGAAACAGGGAGCATGGATGAAATTCATATGTATAGGGACCAATTTTTTTTCAGCTGCTTATTTTCAGTTCCCGTGTTCTTATTTGCCATGGTACTTCCCATGCTTCCTCCTTATGGCAACTGGTTGAACTATAAGATCCACAATATGTTAACCATTGGAATGTTTCTAAGATGGGTCCTTAGCGCACCTGTTCAGTTCATAGTTGGGAAAAGGTTCTATGTTGGATCATATCATGCACTGAGGCGAAGATCTGCTAACATGGATGTGCTGGTTGCACTTGGAACTAATGCTGCGTATTTTTACTCTATTTATATTCTAATAAAAGCTCTCACTTCAGTAACATTTCAAGGACAAGATTTCTTTGAGACCAGTTCCATGTTAATATCCTTTATTCTCTTGGGAAAATATTTGGAGGTTGTGGCTAAAGGGAAAACGTCAGATGCTTTAGCAAAGTTGACACAACTTGTTCCTGATAAAGTTTGTTTATTGGCCCTGGATGCTGATGGAAATGTCATCTTTGAGACAGAAGTCGACACTCAATATATACAAAGGAACGACATAATTAGAATTGTTCCTGGGGCCAAAATTCCTGTCGATGGTATTGTTATAAAAGGGCAAAGTTATGTAAATGAAAGTATGATCACGGGTGAGGCAACACCTATTGATAAAAGTCCGGGAGACAAGGTTATTGGTGGGACCGTGAATGAGAATGGCTGCTTACTGGTTAAGGCCACACATGTTGGAACAGAAACTGCACTTTCTCAAATTGTTCAGCTTGTAGAATCTGCTCAACTCGCTAAAGCACCGATTCAAAAACTTGCTGACCAAATTTCAAAAGTTTTTGTTCCAATAGTGGTTGTCGCAGCATTCGTAACCTGGTTGGGATGGTTTATTCCAGGGGAAGCTGGCATTTACCCTAAGTATTGGATACCAAAAGCTATGGATGCATTTGAGCTTGCTTTGCAGTTTGCTATTTCAGTTCTAGTTGTTGCCTGCCCATGTGCTCTGGGTCTAGCAACGCCTACAGCAGTCATGGTTGCTTCAGGTATGGGTGCTTCTCAAGGGGTACTCATCAAGGGAGGGGATGCGCTAGAAAAGGCACACAAGGTTAAAGTTGTTGTGTTTGATAAGACCGGGACACTTACCATTGGAAAACCAGAGGTAGTTAGTGCGGTGCTATTTTCTGAATTTTTGATGGAGGAGTTATGTGACGTGGCTATTGCAGTGGAGGCAAGCAGTGAACACCCAATAGCAAAAGCTGTTGTGGTTTATGCAAAGAGGCTGCGCCAGAAGTTTGGGTCTAGTGCTGAGCAAGTCTTTGATGTGAAGGACTTCGAAGTGCACATGGGGGCTGGGGTAAGTGGAAAAGTTGGTGGGAGAACAGTTTTAGTTGGGAACAAACGACTGATGCATTCTGGTAACGTTCCCATAAGTCCCGAGGTTGAAAGGTATGTTTCTGAAAATGAAGTTATGGCTAGAACTTGTGTGTTGGTTTCAATCGACGGAAAGATTGCTGGAGCTTTTTCTGTAACTGATCCTGTAAAGCCTGGGGCTAAGCATGTGATATCTTTTCTCCACTCCATGGGCATCTTAAGCATCATGGTGACCGGCGATAACTGCGCTACTGCAACTGCTATTGCAAATGAAGTTGGTATAGACGAGGTCTTCGCTGAGACTGATCCACTGGGGAAAGCAGATAAGGTTAAAGACTTACAGATGAAAGGTATGGTGGTGGCAATGGTGGGCGATGGAATCAATGACTCACCAGCTTTAGTCGCTGCTGACGTCGGCATGGCAATCGGTGCTGGAACTGACATAGCCCTAGAAGCAGCTGATATAGTTCTGGTCAAAAGCAGCTTGGAAGATGTAGTTACAGCCATAGATCTGTCAAGGAAGACAATGTCTCGAATCCGTCTCAACTATATCTGGGCTCTTGGTTACAACATTCTTGGCATGCCAATTGCTGCTGGCATCTTGTTCCCCTTCACCGGAATCAGGTTGCCCCCGTGGGTTGCAGGTGCTTGCATGGCTGCTTCTTCTCTCAGTGTTGTTTCTTCCTCTCTCTTGTTGCAGCTCTACAAGAAACCTTTGCACGTGGCGTCCTCTTGA 3054 0.4394 MEKPPLKRRAVADEKAETAFKQAKLPVNPGASXFLRKPLVETAAHQPPLVFYFESMNPLSQKGIAEASRMHDLKTPLLQTPQDATLREVKFRIQDITCASCVNSIESVVGNLDGVNGVMVSAIDGKATVKYVPKLISVKKIKETVEEAGFKVHELSEQDISVCKVRIKGMACTSCSESVERALQMVDGVKKAAVGLALGEAKVHFDPNLTDTNKIIEAIEDAGFGVDLISSGTDVNKVHLRLEGLDSPEDVNVVMSSLELAEGVNHVEMDLTERKVTVTYDPDVTGPRSLIQCIQAVAHGPSGYHATLYSPSRQRETGSMDEIHMYRDQFFFSCLFSVPVFLFAMVLPMLPPYGNWLNYKIHNMLTIGMFLRWVLSAPVQFIVGKRFYVGSYHALRRRSANMDVLVALGTNAAYFYSIYILIKALTSVTFQGQDFFETSSMLISFILLGKYLEVVAKGKTSDALAKLTQLVPDKVCLLALDADGNVIFETEVDTQYIQRNDIIRIVPGAKIPVDGIVIKGQSYVNESMITGEATPIDKSPGDKVIGGTVNENGCLLVKATHVGTETALSQIVQLVESAQLAKAPIQKLADQISKVFVPIVVVAAFVTWLGWFIPGEAGIYPKYWIPKAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGDALEKAHKVKVVVFDKTGTLTIGKPEVVSAVLFSEFLMEELCDVAIAVEASSEHPIAKAVVVYAKRLRQKFGSSAEQVFDVKDFEVHMGAGVSGKVGGRTVLVGNKRLMHSGNVPISPEVERYVSENEVMARTCVLVSIDGKIAGAFSVTDPVKPGAKHVISFLHSMGILSIMVTGDNCATATAIANEVGIDEVFAETDPLGKADKVKDLQMKGMVVAMVGDGINDSPALVAADVGMAIGAGTDIALEAADIVLVKSSLEDVVTAIDLSRKTMSRIRLNYIWALGYNILGMPIAAGILFPFTGIRLPPWVAGACMAASSLSVVSSSLLLQLYKKPLHVASS 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0034 1017 ProSiteProfiles Heavy-metal-associated domain profile. 162 228 IPR006121 GO:0046872
Lele12g0034 1017 Gene3D - 234 310 - -
Lele12g0034 1017 SUPERFAMILY Calcium ATPase, transduction domain A 490 575 IPR008250 -
Lele12g0034 1017 SUPERFAMILY HMA, heavy metal-associated domain 83 158 IPR036163 GO:0046872
Lele12g0034 1017 CDD HMA 164 226 IPR006121 GO:0046872
Lele12g0034 1017 FunFam Copper-transporting ATPase HMA5 160 231 - -
Lele12g0034 1017 ProSiteProfiles Heavy-metal-associated domain profile. 88 154 IPR006121 GO:0046872
Lele12g0034 1017 SFLD Haloacid Dehalogenase 671 948 - -
Lele12g0034 1017 ProSitePatterns E1-E2 ATPases phosphorylation site. 691 697 IPR018303 -
Lele12g0034 1017 PRINTS Copper-transporting ATPase 1 signature 185 206 - -
Lele12g0034 1017 PRINTS Copper-transporting ATPase 1 signature 88 113 - -
Lele12g0034 1017 PRINTS Copper-transporting ATPase 1 signature 114 137 - -
Lele12g0034 1017 Gene3D - 161 232 - -
Lele12g0034 1017 Gene3D - 700 829 IPR023299 GO:0000166
Lele12g0034 1017 Gene3D - 82 158 - -
Lele12g0034 1017 SUPERFAMILY HAD-like 687 1002 IPR036412 -
Lele12g0034 1017 TIGRFAM TIGR00003: copper ion binding protein 165 226 IPR006122 GO:0005507
Lele12g0034 1017 TIGRFAM TIGR00003: copper ion binding protein 89 152 IPR006122 GO:0005507
Lele12g0034 1017 Gene3D - 457 579 - -
Lele12g0034 1017 Gene3D - 680 946 IPR023214 -
Lele12g0034 1017 ProSitePatterns Heavy-metal-associated domain. 167 196 IPR017969 GO:0046872
Lele12g0034 1017 FunFam ATPase copper transporting beta 84 157 - -
Lele12g0034 1017 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 79 1012 - -
Lele12g0034 1017 Pfam E1-E2 ATPase 489 667 - -
Lele12g0034 1017 SUPERFAMILY HMA, heavy metal-associated domain 159 231 IPR036163 GO:0046872
Lele12g0034 1017 ProSiteProfiles Heavy-metal-associated domain profile. 237 303 IPR006121 GO:0046872
Lele12g0034 1017 CDD HMA 90 153 IPR006121 GO:0046872
Lele12g0034 1017 Pfam Heavy-metal-associated domain 241 296 IPR006121 GO:0046872
Lele12g0034 1017 Pfam Heavy-metal-associated domain 165 224 IPR006121 GO:0046872
Lele12g0034 1017 Pfam Heavy-metal-associated domain 91 151 IPR006121 GO:0046872
Lele12g0034 1017 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 442 974 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele12g0034 1017 Pfam haloacid dehalogenase-like hydrolase 685 910 - -
Lele12g0034 1017 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 402 1005 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele12g0034 1017 FunFam Copper-transporting ATPase 1, putative 457 579 - -
Lele12g0034 1017 CDD P-type_ATPase_Cu-like 330 992 - -
Lele12g0034 1017 SUPERFAMILY Calcium ATPase, transmembrane domain M 434 683 IPR023298 -
Lele12g0034 1017 SFLD p-type atpase 671 948 IPR044492 -
Lele12g0034 1017 CDD HMA 240 307 IPR006121 GO:0046872
Lele12g0034 1017 FunFam Probable copper-transporting ATPase HMA5 816 953 - -
Lele12g0034 1017 PRINTS P-type cation-transporting ATPase superfamily signature 896 915 - -
Lele12g0034 1017 PRINTS P-type cation-transporting ATPase superfamily signature 689 703 - -
Lele12g0034 1017 PRINTS P-type cation-transporting ATPase superfamily signature 919 931 - -
Lele12g0034 1017 PRINTS P-type cation-transporting ATPase superfamily signature 525 539 - -
Lele12g0034 1017 PRINTS P-type cation-transporting ATPase superfamily signature 821 832 - -
Lele12g0034 1017 PRINTS P-type cation-transporting ATPase superfamily signature 843 853 - -
Lele12g0034 1017 SUPERFAMILY HMA, heavy metal-associated domain 232 309 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0034 Lele-ChrLele12 404214 412004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0034 91 1011 Primary Pumps ATPases AT1G63440 57.605 0.0 1077