Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0025 ATGGGGAAGGGAGCCACGTTGCACGAAAGGGGGAGGGCATTATGGTCAAGATGGGAGGAAAGCATGCCCAATCTGGCCAGGCCGATAACAAAATGGTGTACTCCGCATCAGCTAGCTTTTCTTCCTTCTTCTTTTGGTGCCCCATACTCTGCCGCCACTGTTTTGTTTATGTTGTTTGCTTCCGCCGTCCTCTGTCGTGTAGCTTTTATTTCATCTCATAATTACGCAGTCTTCCTGGTCCTCGAGATGAGAGAACAGGAAATGGAGTCAGATCTCCAGCCGCACCCTCCCATGTTTCGCGATCAGCAGCAGATGAATTCGGGCCTCACGCGTTACCGATCGGCGCCCACTTCCTATTTTACCGATATAATTGACAAGGAGTGCTATGAGCACATATTCAATCGACCATCTAGCCCCGAGACTGAGCGAATTTTTTCTCGCCTTATCAGTAGTTTTGCTGAGGACCCCCCTCCTCAAAGTCTCGCGTCCCTTCCTGTAAAGCAAGAGGACGGCCTGAACCAGCAGGCTCAAGCTCAGGCTCAGTCTCAGCCCGTGCCGTCCGTCAATAATGAACCGGCGCTTCTGCGGCGGCAGCGGAACAACATGAATACTTACGAGAGTGCTCCTCGTAACTTATACACGAGCTCAGCGAAACCGCCTCTGCCAAATCAGAGCCTCCCCTCGGCGAATCTGTTGCCACACGTGAAAACTGGACTTGGGAATACTACTTCTAATCTTACCAGGCATAATAGCTCCCCTGCAGGACTCTTTGCTAACTTCAACATTGATCCTGGCTATGTTGCGTCTTTGAGAGGCATGGGAACTTTTGCAGCTGCAGATAACGCTACCGAAGCGACGAACTTTTCTTCTGCAGGGACGTTGAAGAACCGACCGGCTTACTCATCGGAGTTGATGTCATCCATAGCTGAAATCGGAGATAATAACAGCATAGAATTAGATAATCCCCAGAAGGAGGCCTTTAGTGAAAGCCAGGGCAATGATTTTATGTCGGCTTTCGCTTTAGATCCTTGGGATGATTCTGCAATCACGTCTGACAATATTAGTGGTCATAAAAGATACAGAGATGATGAGAATGATGCAAAACCATTTTCTGGTTTAAGTGCGGCGGAAGTCAAGAATGAGATGGGAACCCAGGGCAGTGGTCCTTCCCCATTGACTCATCACTTGAGTTTGCCGAAAACTGCAATGGAGATGGCAGCCGTAGAGAAGATATTGCAGTACTCAGATTCTGTTCCCTGTAAAATTCGTGCCAAGCGAGGCTGTGCCACTCACCCCCGAAGCATTGCAGAGCGGGTTAGAAGAACTAAAATTAGCGAGCGCATGAGGAAACTACAAGATCTGGTTCCCAACATGGACAAGGTAAGATATAATCAAATCAGCCATTTCCCTGGTGGACACTATGATGAGGCCGTGACATGCAAAATCATAATAATATATTTCCTTGCCCTTTCTAGCAAACAAACACGGCAGACATGTTGGACTTGGCTGTCAACTACATTAAAGACCTTCAAAAGCAGGTTCAGGCACTTTCAGACAGCCGATCTAGATGTACATGTTTGCAGAAGCAGCATCAATAACGGGGAAGAGGAGGGATGCAAGACTAGGCTTTTGTACAGATTTGTAACGAATAATATGGTCGAGTAG 1665 0.4793 MGKGATLHERGRALWSRWEESMPNLARPITKWCTPHQLAFLPSSFGAPYSAATVLFMLFASAVLCRVAFISSHNYAVFLVLEMREQEMESDLQPHPPMFRDQQQMNSGLTRYRSAPTSYFTDIIDKECYEHIFNRPSSPETERIFSRLISSFAEDPPPQSLASLPVKQEDGLNQQAQAQAQSQPVPSVNNEPALLRRQRNNMNTYESAPRNLYTSSAKPPLPNQSLPSANLLPHVKTGLGNTTSNLTRHNSSPAGLFANFNIDPGYVASLRGMGTFAAADNATEATNFSSAGTLKNRPAYSSELMSSIAEIGDNNSIELDNPQKEAFSESQGNDFMSAFALDPWDDSAITSDNISGHKRYRDDENDAKPFSGLSAAEVKNEMGTQGSGPSPLTHHLSLPKTAMEMAAVEKILQYSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKVRYNQISHFPGGHYDEAVTCKIIIIYFLALSSKQTRQTCWTWLSTTLKTFKSRFRHFQTADLDVHVCRSSINNGEEEGCKTRLLYRFVTNNMVE 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0025 554 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 216 461 - -
Lele12g0025 554 MobiDBLite consensus disorder prediction 171 190 - -
Lele12g0025 554 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 431 466 IPR036638 GO:0046983
Lele12g0025 554 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 428 490 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0025 Lele-ChrLele12 358914 361416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0025 88 459 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 33.415 7.22e-48 169