Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0012 ATGGCTAACCCGTCTGGGAACCATCAGGAGCAAACCCATGTTTCGTCTTCGTTCAACGGGGTTAGTGGTGCCAATCCCAACAACGGCAGTTCGGCTCCGGAGAGTTCAGGTGCTGCTCAAGCCATGAAACACAACCCGGGTATATCCTTGGATTGGACGCCTGATGAGCAGGCCATACTAGAAGAGGGGCTCGCAAAGCTTACCTCAGAATCTAACATAATACGCTATGCGAAGATAGCCCTACAACTACAGAATAAGACAGTCCGGGATGTTGCACTCCGTGTTAGATGGATGAATAAAAAAGAAAATAGCAAGAGAAGGAAGGATGATTTGACGAGGAAAAGTAAAGATAAAAAGGAAAGGGTTTCTGATCCATCAACAAAATCATCTCACTTTGTCACTCAGTCCAATGTTTCTCCATATGCTCCACCAATGATTATGATGGACAATGATGATGGCATTTCCTACAAAGCTATTGGAGGTCCCACAGGTGAACTATTGGAGCAAAATGCGCAGGCTTTAAATCAAATATCTGCAAATCTTGCTGCTTTCCAGATACAGGAGAACATTAATCTATTCTGCCAAACAAGAGATAACATCCTTAAAATTATGAACGATTTGAATGACCTGCCAGAGGTGATGAAGCAAATGCCACCCCTACCCATAAAGGTGAATGAAGAGTTGGCTAACTCCATTCTTCCAAGAACAAACCTCCCAACGCAATCATGA 729 0.4376 MANPSGNHQEQTHVSSSFNGVSGANPNNGSSAPESSGAAQAMKHNPGISLDWTPDEQAILEEGLAKLTSESNIIRYAKIALQLQNKTVRDVALRVRWMNKKENSKRRKDDLTRKSKDKKERVSDPSTKSSHFVTQSNVSPYAPPMIMMDNDDGISYKAIGGPTGELLEQNAQALNQISANLAAFQIQENINLFCQTRDNILKIMNDLNDLPEVMKQMPPLPIKVNEELANSILPRTNLPTQS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0012 242 CDD SANT 52 101 IPR001005 -
Lele12g0012 242 Gene3D - 52 128 - -
Lele12g0012 242 SMART sant 48 101 IPR001005 -
Lele12g0012 242 MobiDBLite consensus disorder prediction 1 50 - -
Lele12g0012 242 MobiDBLite consensus disorder prediction 102 126 - -
Lele12g0012 242 MobiDBLite consensus disorder prediction 1 38 - -
Lele12g0012 242 Pfam Protein of unknown function (DUF3755) 183 216 IPR022228 -
Lele12g0012 242 Coils Coil 94 121 - -
Lele12g0012 242 MobiDBLite consensus disorder prediction 102 139 - -
Lele12g0012 242 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 9 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0012 Lele-ChrLele12 259774 265604 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele12g0012 DUF3755 7.2e-19 No_clan