Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0004 ATGGAAGGAGGAGGGGGCGCTCATCCTGGTGACACCGTGATGTCGGAGGCAACACAGCCTGATCCCCGACAACAGCAGCAGCCGAAGGCTATGGGGATTGAGAATATCCCCGCTACTCTTAGCCATGGCGGCAGGTTCATCCAATACAATATCTTCGGCAATATATTCGAAGTCACAGCCAAATACAAGCCCCCCATCATGCCCATCGGTAAAGGCGCTTACGGTATCGTCTGTTCGGCTCTCAATTCCGAGACCAACGAGCACGTAGCCATCAAGAAGATTGCCAATGCATTTGACAACAGAATTGATGCCAAGAGGACCCTCCGCGAAATCAAGCTGCTCCGACACATGGATCATGAAAACGTTGTTGCAATTAGGGATATAATACCACCACCACAGAGGGAAGCATTTAATGATGTTTACATTGCATATGAGCTAATGGACACTGACCTTCACCAAATTATTCGATCAAATCAAGCATTATCAGAGGAGCACTGTCAGTATTTCCTGTATCAAATCCTACGTGGGCTGAAGTACATTCATTCAGCAAATGTTCTGCATAGGGACCTAAAACCTAGCAATCTTCTCCTGAATGCCAACTGTGACTTAAAAATTTGTGATTTTGGACTGGCTCGTGTTACCTCTGAAACTGACTTTATGACTGAATATGTTGTTACAAGATGGTATCGTGCACCAGAGCTTTTGTTGAACTCTTCTGATTACACTGCAGCTATTGATGTATGGTCTGTTGGGTGTATATTCATGGAACTGATGGATCGAAAACCATTGTTTCCTGGTCGAGATCATGTGCATCAGTTACGTCTACTAATGGAGCTGATTGGCACCCCTTCAGAAGCTGATTTGGGCTTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTGCCACTTTACCATCGCCAGTCTTTCCAAGAAAAGTTTCCCCATGTCCATCCTGCAGCTATTGATCTTGTTGAAAAAATGTTAACTTTTGATCCTAGACAAAGAATTACTGTTGAAGATGCACTGGCACATCCCTACTTGACATCTTTGCATGACATCAGTGATGAACCTGTGTGCATGACTCCCTTTAGCTTCGACTTTGAGCAACATACTCTGACTGAGGAACAGATGAAGGAGTTGATATATCGAGAGGCTCTTGCATTTAACCCCGAGTATCAGCATCACTGA 1191 0.4442 MEGGGGAHPGDTVMSEATQPDPRQQQQPKAMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNRIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYHRQSFQEKFPHVHPAAIDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHTLTEEQMKELIYREALAFNPEYQHH 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0004 396 Gene3D Transferase(Phosphotransferase) domain 1 147 375 - -
Lele12g0004 396 ProSitePatterns MAP kinase signature. 98 201 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele12g0004 396 ProSiteProfiles Protein kinase domain profile. 63 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0004 396 Gene3D Phosphorylase Kinase; domain 1 46 385 - -
Lele12g0004 396 Pfam Protein kinase domain 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0004 396 FunFam Mitogen-activated protein kinase 48 157 - -
Lele12g0004 396 SUPERFAMILY Protein kinase-like (PK-like) 68 356 IPR011009 -
Lele12g0004 396 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 61 349 - -
Lele12g0004 396 SMART serkin_6 63 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0004 396 MobiDBLite consensus disorder prediction 1 29 - -
Lele12g0004 396 ProSitePatterns Protein kinases ATP-binding region signature. 69 93 IPR017441 GO:0005524
Lele12g0004 396 FunFam Mitogen-activated protein kinase 147 375 - -
Lele12g0004 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Lele12g0004 396 CDD STKc_TEY_MAPK 56 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0004 Lele-ChrLele12 49620 55898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0004 1 395 MAP Kinase Gene Family AT2G43790 87.595 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele12g0004 Pkinase 2e-73 CL0016