Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1295 ATGAATTCGGGCCTCACACGTTACCGATCGGCGCCCACCTCCTATTTTACCGATATAATTGACAAGGAGTGCTATGAGCACATATTCAATCGACCATCTAGCCCCGAAACCGAGCGAGTTTTTTCGCGCCTTATCAGTAGTTTTGCCGAGGACCCCCCTCCTCAAACTCTCACGTCCCTTACTGTAAAGCAAGAGGACGGCCTGAACCAGCAGGCTCAGGCTCAGGCTCAGGCTCAGTCTCAGTCTCTGGCCATGCCGTCCGTCAATAATGAACCGTCGCTTCTGCGGCGCCAGCAGAACAACATGAATACTTGCGAGAGAGCACATCGTAGTTTATACACTAGCTCAGCGAAACCGCCTCTGCCAAATCAGAGCCTCCTCTCGGCGAATCGGTTGCCACCTATGAAGACTGGACTTAGCAATACTACTTCTAATCTTACCAGGCATAATAGCTCTCCTGCAGGACTCTTTGCTAACTTCAACGTTGATCCTGGCTATATTGCGGCTGTGAGAGGTATGGGAACTTTTGCATCCGCAGATAACGCTACAGAAGCGACAAACTTTCCTTGTGCAACAGGGACTTCGAAGAACCGACCGGCTTACCCGTCGGGCTTAATGTCATCCATAGCTGAAATCGGAGATAAAAACAGCATAGAATTAGATAATCCCCAGAAGGAGGGCTTTAGTGAAAGCCAGGGAAATGATTTTATGTCGGCTTTCCCTGTAGATCCTTGGGACGATTCTGCAATCATGTCAGACAATATTAGTGGTCATAAAAGATACAGAGATGATGAGAATGATGCAAAACCATTTTCTGGTTTAAGTGCGGCGGAAGTCAAGAATGAGATGGGAAGCCAGGGCAGTGGTCCTTCTCCATTGACTCATCACTTGAGTTTGCCGAAAACTGCAATGGAGATGGCAGCCATAGAGAAGATATTGCAGTACTCAGACTCTGTTCCCTGTAAAATTCGTGCCAAGCGAGGCTGTGCCACTCATCCCCGAAGCATCGCAGAGCGGGTTAGAAGAACTAAAATTAGCGAGCGCATGAGGAAACTACAAGATCTGGTTCCCAACATGGACAAGCAAACAAACACGGCAGACATGTTGGACTTGGCTGTCGACTACATTAAAGAGCTTCAAAAGCAGGTTCAGCACTGGCTATTCAATTGTAACTTACTTTCTTGCCATCCACATGATTGTGCAGGCACTTTCAGACAGCAGATCAAGATGTACGTGTTTGCAGAGGCAGCATCAATAACTGGATGGAGGGCCGACGCAAGACCAGCCTTTTGTACAGATTTGTAA 1305 0.4789 MNSGLTRYRSAPTSYFTDIIDKECYEHIFNRPSSPETERVFSRLISSFAEDPPPQTLTSLTVKQEDGLNQQAQAQAQAQSQSLAMPSVNNEPSLLRRQQNNMNTCERAHRSLYTSSAKPPLPNQSLLSANRLPPMKTGLSNTTSNLTRHNSSPAGLFANFNVDPGYIAAVRGMGTFASADNATEATNFPCATGTSKNRPAYPSGLMSSIAEIGDKNSIELDNPQKEGFSESQGNDFMSAFPVDPWDDSAIMSDNISGHKRYRDDENDAKPFSGLSAAEVKNEMGSQGSGPSPLTHHLSLPKTAMEMAAIEKILQYSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQVQHWLFNCNLLSCHPHDCAGTFRQQIKMYVFAEAASITGWRADARPAFCTDL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1295 434 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 329 379 IPR011598 GO:0046983
Lele11g1295 434 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 112 384 - -
Lele11g1295 434 SMART finulus 335 385 IPR011598 GO:0046983
Lele11g1295 434 Gene3D - 331 387 IPR036638 GO:0046983
Lele11g1295 434 FunFam Transcription factor bHLH130 family 330 397 - -
Lele11g1295 434 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 332 395 IPR036638 GO:0046983
Lele11g1295 434 Pfam Helix-loop-helix DNA-binding domain 334 380 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1295 Lele-ChrLele11 19754781 19756754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1295 2 384 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 38.537 9.99e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele11g1295 HLH 5.8e-10 No_clan