Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1289 ATGACCGACCCCAATAATTCCTTCAATTCTCCCTTCCTTTTCTCTTGCACCTTCAACAACTTTCCTTCTACTGATCATAATAACTCTCCTCCTCCAAGAGAAGCCCTACCTCTTCTTAACCTAAACCCTCCGAGACTTGATGAAGATGATGATGTGAAAGAAGAAGCAGGCATGGCGTGTAGTTCTTTGAATGATGATCCTGTGACGCTGGCTTTGCAATTACACCTAGGGCTTCCAACCGCAAGTACTTCGTCGACTGACTTGCCCGATTCGAACTTATACTCATCAGAGACACTAGTTTCAGACAAAGATGAAGTGACCACTGTGTCTTCTGGGTATCTCTCCGATAGGATCACTCGAGGCGGTCAGTATTGGATCCCTACTCCTGCTCAGATTCTGATTGGCCCCACTCAGTTCTCTTGCCCTCTTTGTCTCAAGACCTTCAACAGGTACAACAACATGCAGATGCATATGTGGGGGCATGGATCTGAATATAGAAGGGGACCAGAGTCTCTGAGGGGAACACAGCCAACGGCAATGCTGAGGCTTCCATGCTATTGTTGTGCGCCTGGGTGCAAGAACAACATCGAGCATCCGAGAGCCAAACCTCTGAAGGACTTCAGAACGCTTCAGACTCATTACAAGAGAAAGCATGGGATCAAACCTTTCATGTGTAGAAAATGTTGCAAAGCATTTGCAGTGAGAGGTGATTGGAGAACGCACGAGAAGAACTGTGGAAAGCTCTGGTATTGCTCCTGTGGCTCTGACTTCAAGCATAAAAGATCTCTTAAAGATCATATCAAGGCTTTCGGACATGCCCACACGCCTTGTGATGCTGATGATTGTCTCCATCAAGATGAGGTGATGGCGGCCTCTGAAATTGACCACCCAAATCATTCCTTTCACTCTCATCATACCTAA 921 0.4658 MTDPNNSFNSPFLFSCTFNNFPSTDHNNSPPPREALPLLNLNPPRLDEDDDVKEEAGMACSSLNDDPVTLALQLHLGLPTASTSSTDLPDSNLYSSETLVSDKDEVTTVSSGYLSDRITRGGQYWIPTPAQILIGPTQFSCPLCLKTFNRYNNMQMHMWGHGSEYRRGPESLRGTQPTAMLRLPCYCCAPGCKNNIEHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGHAHTPCDADDCLHQDEVMAASEIDHPNHSFHSHHT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1289 306 MobiDBLite consensus disorder prediction 23 54 - -
Lele11g1289 306 FunFam Zinc finger protein WIP2 192 274 - -
Lele11g1289 306 PANTHER ZINC FINGER PROTEIN WIP2 19 297 IPR043584 GO:0003700|GO:0010468
Lele11g1289 306 ProSitePatterns Zinc finger C2H2 type domain signature. 141 161 IPR013087 -
Lele11g1289 306 ProSiteProfiles Zinc finger C2H2 type domain profile. 139 166 IPR013087 -
Lele11g1289 306 SUPERFAMILY beta-beta-alpha zinc fingers 205 243 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1289 Lele-ChrLele11 19729403 19731262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1289 28 295 C2H2 Transcription Factor Family AT1G51220 64.413 1.31e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele11g1289 None None None