Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1280 ATGAGGAAGTCGGGGGAGCCCTCTGGAAAAAATAAGGAGCTTAGAAAAGGTTTGTGGTCACCGGAAGAAGATGACAAGCTCATGAGGTACATCCGCAACAATGGACAAGGTTGTTGGAGTGATGTGGCCAGAAACGCTGGCTTGCAAAGATGGTCTCAAATAGCGGCACGCTTGCCTGGACGAACAGACAATGAAATAAAGAACTTTTGGAATTCCACAATTAAAAGAAGACTCAAGAACTCTTTAGCCACGAAAGATGTCAATACGGGAGGGCTTGTTTCAGGTCAAGATCAACACAGCTTTAACGTGCCTATCTTGAACTCGTCTCCATCTTCATTCCCAGTTGACAGGATTCCTCAGCGAAGCTTGCAATGTGCAGGTGGATTACTCTCAGCAAGTCAAGTGGCTGAGAAAGTGGAGATCACGTGCCACGCACACACTACTACTACCAATGCTTACTTTGAAGACGTAAACAGTGAGAGAGCTGAGGTAGAGAATTTATTTGAACAAGAGTTAATGATGATGGGAATGGGAGATTGGAATCTGGAGGATCTCATGAAGGATATTCCCTCATCTTCCTTCCTTGATTTTTCTGATCAACGCTTCTTCTCCCACCCCATATAA 624 0.4471 MRKSGEPSGKNKELRKGLWSPEEDDKLMRYIRNNGQGCWSDVARNAGLQRWSQIAARLPGRTDNEIKNFWNSTIKRRLKNSLATKDVNTGGLVSGQDQHSFNVPILNSSPSSFPVDRIPQRSLQCAGGLLSASQVAEKVEITCHAHTTTTNAYFEDVNSERAEVENLFEQELMMMGMGDWNLEDLMKDIPSSSFLDFSDQRFFSHPI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1280 207 PANTHER MYB DOMAIN PROTEIN 55 9 50 - -
Lele11g1280 207 SMART sant 15 76 IPR001005 -
Lele11g1280 207 ProSiteProfiles Myb-like domain profile. 11 74 IPR001005 -
Lele11g1280 207 CDD SANT 19 71 IPR001005 -
Lele11g1280 207 Gene3D - 47 80 - -
Lele11g1280 207 Gene3D - 13 46 - -
Lele11g1280 207 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Lele11g1280 207 Pfam Myb-like DNA-binding domain 16 72 IPR001005 -
Lele11g1280 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 78 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1280 Lele-ChrLele11 19667891 19669127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1280 12 79 MYB Transcription Factor Family AT5G12870 53.704 2.43e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele11g1280 Myb_DNA-binding 3.8e-12 CL0123