Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1262 ATGATCTCCGGTCACGCCCTTCTCGAAAACTTTGATGCTTCCCTCGACGGACAGAATCCTCCTCCTTCCTCGTTCTCAAATGGTACCTTGGTCGACGGGCTTATTTTTGGCACCAGTTCAAATGAAGAATTACCGGTAATTAACAAGTACTCCAATAACATTCTCAGATACATAACCGACATCCTCATGGATGAAGAAGACGACCTGGAGAATAAGCCCTGCATGTTGCAGCAATATTGCGTGGCCCTCCAAGCTGTTGAAAAATCATTCTACGATGTCCTTACTCCCAGTTGCTCCCCATCGCCTCATCACAACCCAGGTCGTAATTTTTTTTATGATAACGTCAAAGATCCACCGTCTGCAAGTAGTTCGGAGAACAGCAACAGCTACAGCAGTACGGATCATTCGAATGAGACCGATTGGTCCTGTTATTTATGTCCTGATCCATTAACAGGGACACAAGAATGCTATTCTCAAAAGAGGAGTCATCAGATAGATGATGTTACAGACGAGGAAGAGGGAAGAGGAAGTAAGATATTGGCGGTGAAATCGGAGGAGGATTCAGAGCAATCGGCGGTGTTCGATGAGCTAGTGGTTTGCCTGGGCGGAAAAGGTAATCAGGGCATGAATATGGAAGGATCTCCTGGCAAGGCACATCGTTCCAAGAAAGGGCCAAATAAAGGGGCAACAGTAGATTTATGGAATCTACTGATTCAATGTGCACAGGCGGTGGCAAACTACGATCAGAGGAATGCAAATGAGCTTCTGAAGCAGATAAGGAAGCACTCTTCTCCATTTGGGGATGGAATTGAGCGTTTGTCTCATTACTTTGCCAATGGACTGGAAACGCGTTTGGCTGCTGGGAAGCCATCTTATATGCCGCTCCATTCCAACGGGGTTTCTGCTGCTGATATGTTGAGAGCTTGCAAGCTATACATCACAGCTTCTCCATTCCAGAGAGCCACCAATTTTATGACAAACCCCATGATATTGAAATCAGGAGGACCGGTCAAGGTTCGGATAACAGGAATCGATTTTCCTCAGCCGGGATTTCGCCCCACCGAGAGGCTTGAGGAGACAGGCAGGCGTTTGGCTAATTATAGCAGAAGGATGAATGTGCCATTTGAGTACAATTGCGTTGCACAGAAATGGGAAACCATACAACTTAAGGATCTCAAAATAGACCCAAGTGAGGTAACAGTCGTGAACTGCATGTACAGAATGAAGAAGCTACCAGATGCGACTGTGGAGGTGGAGTGTCCGAGAGATGCTGTTTTGAAGATCATCAGGGAGATTAAACCAATCCTCTTTATGCATGGAATTGCCAATGGCACCTATAATGCGCCATTTTTCCTAACTCGGTTCAAGGAGGCGCTGTTCCACTTCTCCGCGTTGTATGATATTCTTGCGGCTAACGTGGGGCGTGAAGATCCGCAGAGGATGATGGTTGAGAAAGAGATATTTGGGAAGGATGCTATGAATGTGATAGCGCGTGAGGGGGCGGAGAGAGTAGAAAGACCAGAGACATACAAGCAGTGGCAGGTTAGGAACCAGAGAGCTGGATTCAAGCAAATCTGCTTGGATTCTGAACCGCTCAAGAAAGCAAAAGAATTTGTGAAGACGGAATACCATAAAGATTTTGTGGTCGAGGAAAATGGCAAATGGGTTTTGCTGGGATGGAAAGGCCGTAATATTCATGCTCTTTCCTGTTGGACACCTGCTTAA 1725 0.4626 MISGHALLENFDASLDGQNPPPSSFSNGTLVDGLIFGTSSNEELPVINKYSNNILRYITDILMDEEDDLENKPCMLQQYCVALQAVEKSFYDVLTPSCSPSPHHNPGRNFFYDNVKDPPSASSSENSNSYSSTDHSNETDWSCYLCPDPLTGTQECYSQKRSHQIDDVTDEEEGRGSKILAVKSEEDSEQSAVFDELVVCLGGKGNQGMNMEGSPGKAHRSKKGPNKGATVDLWNLLIQCAQAVANYDQRNANELLKQIRKHSSPFGDGIERLSHYFANGLETRLAAGKPSYMPLHSNGVSAADMLRACKLYITASPFQRATNFMTNPMILKSGGPVKVRITGIDFPQPGFRPTERLEETGRRLANYSRRMNVPFEYNCVAQKWETIQLKDLKIDPSEVTVVNCMYRMKKLPDATVEVECPRDAVLKIIREIKPILFMHGIANGTYNAPFFLTRFKEALFHFSALYDILAANVGREDPQRMMVEKEIFGKDAMNVIAREGAERVERPETYKQWQVRNQRAGFKQICLDSEPLKKAKEFVKTEYHKDFVVEENGKWVLLGWKGRNIHALSCWTPA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1262 574 MobiDBLite consensus disorder prediction 116 138 - -
Lele11g1262 574 MobiDBLite consensus disorder prediction 105 138 - -
Lele11g1262 574 Pfam GRAS domain family 332 572 IPR005202 -
Lele11g1262 574 ProSiteProfiles GRAS family profile. 224 572 IPR005202 -
Lele11g1262 574 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 178 332 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1262 Lele-ChrLele11 19563997 19565814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1262 38 574 GRAS Transcription Factor Family AT5G59450 40.513 5.16e-137 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele11g1262 GRAS 1e-66 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1286 30 15357912 15359215 Lele11g1262 11 19563997 19565814 CCT
Lele09g1259 09 21385993 21387816 Lele11g1262 11 19563997 19565814 hybridization
Lele10g1234 10 23407817 23409649 Lele11g1262 11 19563997 19565814 hybridization