Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1260 ATGTACATTTTATCCACAGCTCATTATTCTATCTCAAGTGATCCTAGTATATTGACGGTTCTGGTGGAAACACAGCACTTTGCTGAGAACTATACGGGAACCTTAAGTTCTGCTGCTCTCTATTCAAAACAACGAGACAATTATCTCTTCCTCCTCCTCCTGTTTCTTTGGCTTCTCCCTCCCTCTGCTCTAAATCTCATTCCTTTCAGTTTCATCCACGGATATCAATCCAACCAAACACCTGTTCCGCTCAATTATGATCAGTATACCGATCCCTTAAAAGGAACTCAGATACTCGACCCGTTAATGAGCTTCGGATCTGTGGAGACAGACTTAGCCGGCAATCCTGCTCTGCTGTCTTCCGTTAGTACGAATGTAGGCTCTCCCCTGGACGAGACCGAGTTCTCTGGCCCTATGCTCGGGTACATAAACCAACTGCTAATGGAAGAGGACATGGGAGACAAGCCCAGCATGTTTCATGATTCCTTGGCTCTTCAAGCGGCCGAGGAATCTTTATACGAGGTTATTGGGAAGAAATACCCTTCCGATTCCTTTAATCAACGTCATCTTCCCGACTATCACCGTGTGGAGACCTCCGAGGAAAGTGTCTCCGGCAACATCAGTGATTATAGCAGTAGTGGCGGTTATGCAACTCCCGGTACCAGCAACTCCGTTGAATCCCGGTGGAGTAACTTGGACTTTACAGAGTACAAACCTTCTCTTCTACAAGCCACATTTCCTGTAGACTTCATTTTCCAGTCTCCTTCAACATCAGCAGCACAACTTTCCACCAACAATATGATTACCTCCTGGCATACTAGCCGTGAATATAATGGTTTCATGGGGAATTACAGTCCAGGGACTGGCTTCTCAGATTCTACACTACCTAGCAAGGACGATTCTCTGTTTCAGTTTAAGAGAGGTATGGAAGAAGCCAGTAAGTTTCTTCCCAAGGACAATCATTTGATTATTGACATAGGGCCGAGCGTCATTTCTCCTTCATTTGAAAAGACTCTAGAGGCCGTAGTCAAGACGGAGAGATACGAAATGGAGCCTCACGTACCTGTCGAGTCAAGAGGAAGGAAGAATCATGAACGGGGAGATGAGATAGATTTAGAGGACACAAGAAGCAGGAAGCAGCCAGCAGTTTACGTGGATGAGAGCGAGCTATCGGAATTATTTGACAAGGTGCTTATTAACACAGGCTGGGGAAAAGACCCTCCTCCCATGTGTATTTGCCATGAGAATTGTAATCATGGACATGGAGAAAACACGGGCGTGCAGAAAAAGGAAGAGCCAAACAAGTCTAGAGATGGAAGGAGCCGTGTTAGAAGACAGAGTTATAATAACTACAATGAAGCGGTGGATCTGAGATCATTGCTTATTCAATGTGCACAAGCTGTATCATCTGATGATCGTGGAACTGCTAATAAGTTATTAAAGCAAATCAAGCAACATTCTTCCTCAAGAGGAAGTGGATCTCAGAGGTTGGCTCACTGCTTTGCAAATGCCCTTGAAGCTCGCTTGGCTGGCATGGGCTCTCAGATCTACGCTGCTTTATCCTCCAAGAGAACTTCTGCTGCGGACATGATCAAAGCATACCAAATGTTTATTACAGCTTGTCCATTCCAGAAGATTGCCGTTATTTTTGCAAACCATACAATTATGCATCTCGTCAAAAATGCAGAAGCACTTCACATTGTCGATTTCGGCATTGGTTATGGCTTCCAATGGCCTTCCTTTATCTTTCGTCTCTCCAAACGAACCGGTGGGCCCCCGATGCTGCGCATCACAGGGATCAATCTCCCACAACCTGGTTTAAGGCCGGCAGAGAGAGTCCAAGAGACAGGGCGGCGCCTCGCGAGGTATTGTAAGCGCTACAATGTTCCATTTGAGTATAATGCTATTGCACAGAAATGGGAAACCATAAGGCTTGAAGACCTGAAGATAAAGAAGGATGAACTCGTGGTTGTGAATTGTCTGAAGCGATTTAAGAATCTTCTTGATGAGACGGTGGTGGTGAATAGTCCTAGAGACACTGTTTTAAAGTTAATTAGGAAGGCAAACCCCAGTCTTTTCCTGCAGACTATAGTCAACGGGTGCTATAATGCGCCATTCTTCGTGACGCGTTTCCGGGAGGCACTGTTCCATTACTCTTCAATGTTTGATATGCTTGACACTAACGTTGATGGTGGAGATCCAACGAGGTTGATGTTTGAAAAGGAGTTTCTCGGAAAAGAGGTAACGAATATCATAGCTTGTGAGGGTTTTGAGAGGACAGAGAGGCCTGAGACGTACAAGCAATGGCAGGTCAGGAACATGAGGGCAGGGTTCAGGCAGCTGCCATTGGATCGGCAACTGGTTGGTAAATTAAGAGGCAAGTTGAGACAAGTGTTCCATAGTGACTTCATGCTCGATGAAGATGGCAATTGGATGCTACAAGGTTGGAAGGGCCGAATTATTCATGCTTCCTCCTGTTGGGTGCCTGCATAA 2493 0.4561 MYILSTAHYSISSDPSILTVLVETQHFAENYTGTLSSAALYSKQRDNYLFLLLLFLWLLPPSALNLIPFSFIHGYQSNQTPVPLNYDQYTDPLKGTQILDPLMSFGSVETDLAGNPALLSSVSTNVGSPLDETEFSGPMLGYINQLLMEEDMGDKPSMFHDSLALQAAEESLYEVIGKKYPSDSFNQRHLPDYHRVETSEESVSGNISDYSSSGGYATPGTSNSVESRWSNLDFTEYKPSLLQATFPVDFIFQSPSTSAAQLSTNNMITSWHTSREYNGFMGNYSPGTGFSDSTLPSKDDSLFQFKRGMEEASKFLPKDNHLIIDIGPSVISPSFEKTLEAVVKTERYEMEPHVPVESRGRKNHERGDEIDLEDTRSRKQPAVYVDESELSELFDKVLINTGWGKDPPPMCICHENCNHGHGENTGVQKKEEPNKSRDGRSRVRRQSYNNYNEAVDLRSLLIQCAQAVSSDDRGTANKLLKQIKQHSSSRGSGSQRLAHCFANALEARLAGMGSQIYAALSSKRTSAADMIKAYQMFITACPFQKIAVIFANHTIMHLVKNAEALHIVDFGIGYGFQWPSFIFRLSKRTGGPPMLRITGINLPQPGLRPAERVQETGRRLARYCKRYNVPFEYNAIAQKWETIRLEDLKIKKDELVVVNCLKRFKNLLDETVVVNSPRDTVLKLIRKANPSLFLQTIVNGCYNAPFFVTRFREALFHYSSMFDMLDTNVDGGDPTRLMFEKEFLGKEVTNIIACEGFERTERPETYKQWQVRNMRAGFRQLPLDRQLVGKLRGKLRQVFHSDFMLDEDGNWMLQGWKGRIIHASSCWVPA 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1260 830 MobiDBLite consensus disorder prediction 424 444 - -
Lele11g1260 830 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 393 817 IPR005202 -
Lele11g1260 830 MobiDBLite consensus disorder prediction 422 447 - -
Lele11g1260 830 MobiDBLite consensus disorder prediction 200 222 - -
Lele11g1260 830 MobiDBLite consensus disorder prediction 351 381 - -
Lele11g1260 830 Pfam GRAS domain family 457 827 IPR005202 -
Lele11g1260 830 MobiDBLite consensus disorder prediction 196 222 - -
Lele11g1260 830 ProSiteProfiles GRAS family profile. 448 828 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1260 Lele-ChrLele11 19549543 19556517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1260 139 830 GRAS Transcription Factor Family AT1G07530 53.672 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele11g1260 GRAS 6.9e-112 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1257 09 21369406 21371712 Lele11g1260 11 19549543 19556517 hybridization
Lele10g1232 10 23393162 23394428 Lele11g1260 11 19549543 19556517 hybridization