Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1253 ATGATTTTATTTGTTGAGTGAATAGTAATGCGACTTCTGGAAACGGGTGTCATCGCTTTAAAAGTTTGTGGATATGTAGCATGGTTTTTACTTTTAACAAAGATTTTGAACCGACTTGTTTTTGGAAACAAGGGGAAGGGATTGATTCTTGTTTCTGGCATGGGTGTTTGTTTGAGCGCCCAAATTAAAGCAGAGAGCCCATGCAACACAGGGTTAAATTCAAAATATGTGAGCAGTGATGGGAATGATGGTAGCAGCACAGGGAGCAAGGTGTCGGCAGTGTCAGTTCCTCAGACTCCGAGGAGTGAGTGCGAGATCTTGCAGTCATGTAATTTAAAGAGTTTCACTTTATCAGAACTGAAGATGGCCACCAGAAACTTCCGTCCAGATAGTGTGTTAGGAGAAGGTGGCTTTGGATCAGTGTATAAAGGGTGGATCGATGAGCACTCTCTGATGGCTTCCAAACCTGGCACCGGCAAGGTTATTGCTGTCAAAAGACTTAATCAAGATGGTTTCCAAGGTCATAAGGAGTGGTTGGCGGAAGTGAACTACCTTGGACAGCTTTCTCATCCTCATCTGGTGAAATTAATTGGTTATTGCCTGGAAGATGAACATCGTCTTTTGGTGTATGAATTCATGCCTCGAGGAAGCTTGGAGAATCATTTGTTCAGAAGAGGTTCATATTTTCAACCTCTCACATGGAGCCTGCGGATGAAGGTTGCTCTTGGTGCTGCAAAAGGCCTTGCGTTTCTTCACAGCAGCAACATCAAAGTGATATACCGGGATTTCAAGACTTCTAATGTCTTACTGGATTCAAGATATAATGCAAAACTTTCTGATTTTGGGCTGGCAAAAGATGGACCAACGGGTGACAAGAGTCATGTGTCAACCAGGGTCATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACAGGCCACCTCACGGCGAAGAGCGATGTGTATAGTTTTGGAGTAGTGCTACTGGAAATGTTATCGGGGCGACGAGCTGTTGATAAGAATAGGCCATGCGGTCAACACAATTTGGTGGAATGGGCTAAGCCATGTCTGGCAAACAAAAGGAAGATCTTTCGCGTTATGGACAGTCGTCTAGAAGGTCAGTATTCGATCGACAGGGCTCATAAGACGGCAATGCTGGCGCTGCGATGCCTCTCCGGTGAGCCCAAGATAAGGCCTGACATGGATGAGGTGGTCAAAGCTCTGGAGCAGCTCCAAGTCTCCGTTGATGAAAATGGAAACCGTCAAAACTCTCGGTCTCGTGCTCGGAGAAGAAGCGCCGATGACTTTAACGGTAGGAGGGCTTATCCCAGGCCCTCTGATTCTCCACTCTACGCTTGA 1362 0.4604 MILFVEXIVMRLLETGVIALKVCGYVAWFLLLTKILNRLVFGNKGKGLILVSGMGVCLSAQIKAESPCNTGLNSKYVSSDGNDGSSTGSKVSAVSVPQTPRSECEILQSCNLKSFTLSELKMATRNFRPDSVLGEGGFGSVYKGWIDEHSLMASKPGTGKVIAVKRLNQDGFQGHKEWLAEVNYLGQLSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLTWSLRMKVALGAAKGLAFLHSSNIKVIYRDFKTSNVLLDSRYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPCGQHNLVEWAKPCLANKRKIFRVMDSRLEGQYSIDRAHKTAMLALRCLSGEPKIRPDMDEVVKALEQLQVSVDENGNRQNSRSRARRRSADDFNGRRAYPRPSDSPLYA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1253 453 FunFam Serine/threonine-protein kinase BIK1 94 212 - -
Lele11g1253 453 ProSiteProfiles Protein kinase domain profile. 127 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g1253 453 ProSitePatterns Protein kinases ATP-binding region signature. 133 165 IPR017441 GO:0005524
Lele11g1253 453 PANTHER OS01G0588500 PROTEIN-RELATED 93 413 - -
Lele11g1253 453 FunFam Probable serine/threonine-protein kinase PBL8 213 429 - -
Lele11g1253 453 SUPERFAMILY Protein kinase-like (PK-like) 101 409 IPR011009 -
Lele11g1253 453 Pfam Protein tyrosine and serine/threonine kinase 131 409 IPR001245 GO:0004672|GO:0006468
Lele11g1253 453 CDD STKc_IRAK 133 412 - -
Lele11g1253 453 MobiDBLite consensus disorder prediction 416 453 - -
Lele11g1253 453 Gene3D Transferase(Phosphotransferase) domain 1 213 437 - -
Lele11g1253 453 Gene3D Phosphorylase Kinase; domain 1 102 212 - -
Lele11g1253 453 MobiDBLite consensus disorder prediction 423 442 - -
Lele11g1253 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1253 Lele-ChrLele11 19516882 19522834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1253 105 417 Glycoside Hydrolase AT3G07070 50.318 6.04e-105 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele11g1253 PK_Tyr_Ser-Thr 2.4e-45 CL0016