Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1235 ATGGTTCAACAGGTATTCCGGAAAGGTCCATGGACAGAACAGGAGGACATCAAATTGGTCTCGTTTGTTAGCTTGTTTGGTGACCGGAGGTGGGATTTTATAGCCAAAGTTTCAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTACTTGCATCCTGGTCTCAAAAGGGGCAAGATGACGCCCCAAGAAGAGCGCCTCGTGCTGGAGCTTCACGCCAAATGGGGAAATAGGTTTGAGAATATGCAGAAAGCCGCTGACTAG 276 0.4746 MVQQVFRKGPWTEQEDIKLVSFVSLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRFENMQKAAD 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1235 91 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Lele11g1235 91 SUPERFAMILY Homeodomain-like 9 83 IPR009057 -
Lele11g1235 91 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Lele11g1235 91 Gene3D - 8 60 - -
Lele11g1235 91 SMART sant 7 57 IPR001005 -
Lele11g1235 91 CDD SANT 10 55 IPR001005 -
Lele11g1235 91 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 4 85 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele11g1235 91 FunFam Myb transcription factor 8 60 - -
Lele11g1235 91 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 59 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1235 Lele-ChrLele11 19407080 19407448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1235 1 88 MYB Transcription Factor Family AT5G59780 84.091 1.61e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele11g1235 Myb_DNA-binding 2e-16 CL0123