Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1234 ATGATTGTCACGTGCAGATGGTCAAGAATTGCACGGAAATTGCCAGGGCGCACAGATAATGAGATCAAGAATTACTGGAGGACTTATATGAGGAAGAAAGCCCAGGAGACAAAGCGGGCTGCCACCCCATCATCAACATCTAATTGTCATTCTTCACTGTCATCAAATAATCGAGCGGTGGGTTCACATCCTTCCAAAGAGAGTGGAGAAGAAAGCTTTTATGATACAGGAGGGCCTAATATGATCGACTCAACAGAAATCAAGATAGGGGGAGATCAAGGTGAACAGTGTTACTCCATGGATGACATATGGAAGGATATTGCTCTGTCAGAAGAGAACGTTCAAAATCCAGTCCATGCTAGTGTTAGGCGTATCGAAGAGGATTACAAATTCTTTTGTTGTCATCTTCCATCTCCTTCTTGGGAGTATTCTTCAAACTCGCTGCGGGTTATGGATGAAGAAGAAAGTAAGACGTTTCTCCCTGCAAGTGATCAGCAATTCTTTTCCAGTTTCGAAAAAGGGGCAGCATTTCTAACTGGCTAA 543 0.4328 MIVTCRWSRIARKLPGRTDNEIKNYWRTYMRKKAQETKRAATPSSTSNCHSSLSSNNRAVGSHPSKESGEESFYDTGGPNMIDSTEIKIGGDQGEQCYSMDDIWKDIALSEENVQNPVHASVRRIEEDYKFFCCHLPSPSWEYSSNSLRVMDEEESKTFLPASDQQFFSSFEKGAAFLTG 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1234 180 Pfam Myb-like DNA-binding domain 6 29 IPR001005 -
Lele11g1234 180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 34 IPR017930 -
Lele11g1234 180 ProSiteProfiles Myb-like domain profile. 6 30 IPR001005 -
Lele11g1234 180 PANTHER MYB DOMAIN PROTEIN 55 2 101 - -
Lele11g1234 180 Gene3D - 2 59 - -
Lele11g1234 180 CDD SANT 6 30 IPR001005 -
Lele11g1234 180 SUPERFAMILY Homeodomain-like 5 34 IPR009057 -
Lele11g1234 180 MobiDBLite consensus disorder prediction 39 63 - -
Lele11g1234 180 MobiDBLite consensus disorder prediction 34 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1234 Lele-ChrLele11 19406440 19406982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1234 6 172 MYB Transcription Factor Family AT3G46130 44.767 2.50e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele11g1234 Myb_DNA-binding 5.1e-07 CL0123