Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1231 ATGTTGTGCAAATTCTTCTGGGAACCAAGCAAGCAGAAGGCGACTTCTAGAAGGTCCATTCAAGATGATCCTTCTCTACCGTCTCAAAGCCATGGCTTGGAGATCTCTGTAATACGTTCTCTTCCCAAGTCAATGTTTACGCAAAGTGAAGGGGAAGAGAAGCCGAACAGCTTAGACTGTGCAATATACTTAGGTGAGTTTGAAGAAGGGGAATGGCTCAAACATCTTCCGAACTGCCACCATGTCTTCCACGTTTCCTGTATTGTCTATCGGCTTCGGTCCAGCTCAAATTGCCCTCTTTGCAGATCTCATGTTCTCCATAATCCTCTCCCCGAGGCTCTAAGTGCTCTGTCGAGGAGATAG 363 0.4683 MLCKFFWEPSKQKATSRRSIQDDPSLPSQSHGLEISVIRSLPKSMFTQSEGEEKPNSLDCAIYLGEFEEGEWLKHLPNCHHVFHVSCIVYRLRSSSNCPLCRSHVLHNPLPEALSALSRR 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1231 120 ProSiteProfiles Zinc finger RING-type profile. 60 102 IPR001841 -
Lele11g1231 120 MobiDBLite consensus disorder prediction 8 31 - -
Lele11g1231 120 SUPERFAMILY RING/U-box 52 108 - -
Lele11g1231 120 PANTHER RING-H2 FINGER PROTEIN ATL16 16 107 IPR044600 GO:0016567|GO:0016740
Lele11g1231 120 Pfam Ring finger domain 59 102 IPR001841 -
Lele11g1231 120 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 107 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1231 Lele-ChrLele11 19392941 19393303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1231 31 106 C3H Transcription Factor Family AT3G18930 44.048 1.82e-17 74.7