LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele11g1228	ATGAGGAACATCTTCTTCGAATATTCTTCTCCTTCTCCCTCTTCTTCCCCTCTATCTTCTCTATCCTCCATCCCACCTTCTTCCCCTCTCCCAACATTCTCCCTTTCTCTCATGGAAGAAAACATTGAGATCGCTCGCTCCCTCATCTCCAAATGGGACTCTAACCAATCTCCCCACGCCAAAATAACTCCTCTTTTCTCCGGCAACCGCCAAGAAGCCAGACACTACCTCAGCGCCGTCAAGGCCTTGCAATCCACCATGCGGTATCTCGTCACGCTGGATTCCACCTCCCCCAGGCTTGTTGATGCTCAACTCTTGATGCAGGCTGCGTTGAAGAGGCTCCAAAAGGAGTTCTATCAGATATTGTCTTCCAACAGAGATCATTTGGATCCTGAGTCCGTTTCCAGTCGCTCCTCCACCTATCAGAGAACCAGTGTTTCCGATTTTGACGATGATTTCTCAGAGGATGAATGCCGTTCTGTCACTGATAATTCCATTTCCGAGACGGAGAGAGTTTCTATGATTTACATGGAGGACTTGAAAGCCATTGCTGAATGCATGATTTCCGCTGGTTATGGAAAAGAGTGCGCTAAGATTTACACCCTCATGAGAAAATCGATCGTCGATGAGGCTATGTACCATCTCGGAGTCGAGAAGCTGACTTTCTCTCAGGTCAAGAAAATGGATTGGGAGGTGATCGAGTTGAAGATTAAGTACTGGCTGAAAGCCATCAAAGTCGCCGTCACAACTCTGTTTTACGGGGAGAGAATTCTCTGCGATCACGTATTTGCCTCTTCAGGGAGAATCGTTGAGTCCTGTTTCGCAGAGATTTGCAGAGAGGCTGCTATGTCTTTGTTTGGATTCCCCGCACTCGTGGCAAAATGCAAGAAAACGCCAGAGAAAATGTTTAGGACTCTTGACTTGTACGAAGCAATCTCCGATAATTGGCCACAAATCGAGTCGATCTTCCCATTCGAATCAACCTCCTCCATCCGATTACAGGTCGTCAATTCCATGGTGAAGCTTGGTGAAGCGGTTCGAACAATGCTTTCCGACTTCGAATCGGCAATTCAGAAGGACAAACCCAAGATGCTGGTGCCAGGTGGAGGGATCCACCCACTCACGCGCTACGTCATGAACTACATCTCATTCCTCGCCGATTACAGCGGCACACTCGCCGACATAGTCGCCGATTGGCCACTAACGACACAATCTCCGTTACCAGAGTCTTACTTCCAAAGTTCAGGAGACGATAACAACCCGTCGTCGGAAATATCGGGGCGGCTCGCATGGCTGATACTCGTTGTCCTCTGTAAACTCGATGGGAGAGCGGAGCTATACAAGGACATCGCACTTTCCTACCTCTTCCTCGCCAATAACCTCCAATACATCATCAGTAAGGTGCGCGCATCTAATCTGAGCTTCCTTCTCGGCGAGGATTGGTTGATGAATCACGAGTCGAAGGTGAAAGAGTATGTATCCAAGTACGAACGCATGGGTTGGAACAAGGTGTTATCGTCACTGCCGGAAGATCCAACGGCGAAGATGTCAGCGGAGCAAGTGAGTGCGTGCTGCAGGAATTTCAACGCCGAATTCAGTGAGACGTGCACGAAACAATCCTCGTGGATAGTAACGGACGCCAAACTACGAGACGAGATCAAAGCGTCGATATCGTCGAAGCTTTTACCGAGATACGGAGAATTCTATGAGAAGCATCGGGTGGAGTCGAGAACGAGAAGAGTATTAGGGTCGGATTCGGTTATGAGGTTTTCACCCGAGGATTTAGCGGGTTACCTGTCAGGCATTTTGTGTGGGGCCGGAGATTCAGGCCGCGTGTAG	1839	0.491	MRNIFFEYSSPSPSSSPLSSLSSIPPSSPLPTFSLSLMEENIEIARSLISKWDSNQSPHAKITPLFSGNRQEARHYLSAVKALQSTMRYLVTLDSTSPRLVDAQLLMQAALKRLQKEFYQILSSNRDHLDPESVSSRSSTYQRTSVSDFDDDFSEDECRSVTDNSISETERVSMIYMEDLKAIAECMISAGYGKECAKIYTLMRKSIVDEAMYHLGVEKLTFSQVKKMDWEVIELKIKYWLKAIKVAVTTLFYGERILCDHVFASSGRIVESCFAEICREAAMSLFGFPALVAKCKKTPEKMFRTLDLYEAISDNWPQIESIFPFESTSSIRLQVVNSMVKLGEAVRTMLSDFESAIQKDKPKMLVPGGGIHPLTRYVMNYISFLADYSGTLADIVADWPLTTQSPLPESYFQSSGDDNNPSSEISGRLAWLILVVLCKLDGRAELYKDIALSYLFLANNLQYIISKVRASNLSFLLGEDWLMNHESKVKEYVSKYERMGWNKVLSSLPEDPTAKMSAEQVSACCRNFNAEFSETCTKQSSWIVTDAKLRDEIKASISSKLLPRYGEFYEKHRVESRTRRVLGSDSVMRFSPEDLAGYLSGILCGAGDSGRV	612

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele11g1228	612	FunFam	Exocyst subunit Exo70 family protein	59	610	-	-
	Lele11g1228	612	MobiDBLite	consensus disorder prediction	1	24	-	-
	Lele11g1228	612	Gene3D	Exocyst complex component Exo70	47	609	-	-
	Lele11g1228	612	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	34	596	IPR004140	GO:0000145\|GO:0006887
	Lele11g1228	612	Pfam	Exo70 exocyst complex subunit	240	600	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Lele11g1228	612	SUPERFAMILY	Cullin repeat-like	65	600	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele11g1228	Lele-ChrLele11	19355508	19357346	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele11g1228	22	606	EXO70 exocyst subunit family	AT5G59730	49.833	0.0	568