Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1219 ATGGAGCAATCGGAAGAACCAGCAAAGCAATCATCGAAAAGGTCGTCATTTCCGAGAGACCCTCGTGGTTCGCTTGAAGTGTTCAACCCTTCTTCCTACTCAACGGATAGTCCATCAGACTCGCCGTTCCGATCTCAGCCAAAGTGGAAAACTTGGATCGAGTCACCAACAACCGCCACTCACAAGGATGAAATCACCAGCACATCATGGATGGCGCTTAAGGACTCCGATAGTCCACCGCCGCAGACTCTGTCCGCCATTCTACACGAGCAACCTGAGCTGACCCCGAAATCTCCGTCCGCCGTGAATTTCGCAGGAGACTTAGGCACGGCGGCGCAGAGAGCCGCTGAGTGGGGATTGGTGCTGAAGACTGACACGGAGACGGGGAAGCCGCAAGGAGTGGCTGTGAGAAACTCGGGAGGAGAGGAACCAAATTCGAAGATTTCGGGTACTTCGAGAAGGAACTCAAACAACTCGGTGAGAAGCTCCGGCGAATTGTCGGACGACGGAGGAAAAGAAATACGGGGATTTCCGAGAGTTTCAGAGGATCTGAAGGATGCTCTGTCGGTGTTCCAACAGACTTTCGTGGTCTCGGATGCTACCAAACCCGATTATCCGATCATGTATGCGAGTGCCGGATTCTTTAAGATGACGGGTTATACTTCCAAGGAGGTCATCGGGAGGAACTGTCGGTTTTTACAGGGAGCGGATACGGATCCAGAGGACGTGGCAAAGATAAGGGAGGCGCTGCAAGCAGGGACTAGTTACTGCGGAAGATTACTGAATTACAAGAAGGATGGCACTCCTTTCTGGAACCTTCTCACTATTTCCCCCATCAAGGACGACGATGGCCAAGTCCTAAAATTTATTGGAATGCTAGTGGAGGTTAGCAAGCACACGGAGGGGTCCAAGGAGAAGACGCTACGTCCTAATGGATTGCCCGAATCTTTGATTCGATATGATGCTCGTCAAAAAGAGAAGGCTTCTTCCACAGTAACTGAGTTAGTGAAGGCAGTGAAGCGGCCCCGAGCATTAAGTGAATCAGGAAAGCGTCCATTGATTAGAAAATCTTTAGGTGATGAACAACAACAAAGAGTAGAAAGTTTGCCAAGGAGGAAATCAGAGAGCGTTGCTGCATTACGACCAAAACCACATGGGGGCCATCGAAATTCAATGCAGCAAATCAATGAGCTCCCTCAAAAGAAGCAGAAAAATCGCCGTCGTTCTTTCATGGGGTTCATTAAGAAAAGTCAGCCCAATGATGAAAGCGTTGAGGACAATGATGAAGTTGTGGAGGGCAGCTCAGAGAGTGAGGAAGAAGATGAGAGGCCCGATAGCATGGATGACAACAAACTAGCGCAAAGGGAGAAGCGAAAGGGTCTTGATCTCGCGACGACACTTGAGCGGATTGAGAAGAACTTTGTCATTACAGATCCAAGATTGCCTGATAATCCCATTATCTTCGCTTCTGATAGTTTCCTAGAACTTACAGAATACAGTCGTGAAGAAATTTTGGGAAGAAATTGCAGGTTTTTGCAAGGACCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAGCCAAACAGAAGTTACGGTGCAGCTGATTAATTATACAAAGAGTGGCAAAAAGTTCTGGAACCTGTTTCATCTGCAACCTATGCGTGATCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTTGATGGTAGTCAGCATGTGGAACCTCTTCATAACTGTATTGCAGAAGACACGGCAAAGGAGGGAGAACAATTGGTTAAAAACACTGCAGAAAATGTTGATGAGGCAGTGAGAGAACTTCCAGATGCCAATTTGAAACCAGAAGATTTATGGTTAAATCACTCAAAAGTGGTTCATCCAAAACCTCATAGGAAGGATAACCCTGCTTGGGGAGCTATCCTGAAGATCCTAGAAAGTGGAGAACAGATAGGCTTGAAGCATTTTAGGCCAGTCAAACCCTTGGGATCTGGGGACACTGGCAGTGTGCATTTGGTGGAGCTATGTGGAACTAGCCAATATTTCGCCATGAAGGCTATGGATAAAGGTGTTATGCTAAATCGAAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTCGACATGTTGGACCATCCTTTTCTTCCAGCATTATATGCTTCTTTTCAGACCAAAACTCACATTTGCCTGATAACTGATTATTGTCCCGGTGGAGAACTGTTCCTGCTTCTCGACCGGCAGCCAACGAAAGTTATCAAAGAAGATGCAGCAAGGTTTTATGCTGCTGAGGTTGTCGTTGCACTGGAGTACCTACATTGTCAAGGAATAATATATCGGGATTTAAAGCCAGAAAATGTGTTACTCCAGAGTAATGGGCATGTGTCTCTGACAGATTTTGACTTGTCATGTTTAACATCCAGCATACCACAGCTTTTGATTCCACCTTCAAAAGAAAAGAAGAAACACAAAGGGCAGCAGGCTCCAATATTCGTGGCCGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGTATTCTTCTATACGAAATGATGCTTGGATATACACCATTCAGGGGGAAGACAAGGCAAAAAACATTTGCTAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTCCATGCAAAGCAGTTGATTAACCGGTTGTTGCACAGAGATCCCAAAAACCGATTGGGTTCACAGGAAGGAGCAAACGAAATAAAGCGCCACCCATTCTTCAAAGGTGTCAATTGGGCCCTCGTTCGTACCATGAGCCCTCCTGACCTGGACGCTCCTCTCTTCGGGGCAACGGAAGAAGAGAAGGAAGTCAGAATTGTTGATCCTGCGCTGGAGGAACTCCAAACAGATTTTTTCTGA 2976 0.462 MEQSEEPAKQSSKRSSFPRDPRGSLEVFNPSSYSTDSPSDSPFRSQPKWKTWIESPTTATHKDEITSTSWMALKDSDSPPPQTLSAILHEQPELTPKSPSAVNFAGDLGTAAQRAAEWGLVLKTDTETGKPQGVAVRNSGGEEPNSKISGTSRRNSNNSVRSSGELSDDGGKEIRGFPRVSEDLKDALSVFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGQVLKFIGMLVEVSKHTEGSKEKTLRPNGLPESLIRYDARQKEKASSTVTELVKAVKRPRALSESGKRPLIRKSLGDEQQQRVESLPRRKSESVAALRPKPHGGHRNSMQQINELPQKKQKNRRRSFMGFIKKSQPNDESVEDNDEVVEGSSESEEEDERPDSMDDNKLAQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDSQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAEDTAKEGEQLVKNTAENVDEAVRELPDANLKPEDLWLNHSKVVHPKPHRKDNPAWGAILKILESGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTSQYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLDRQPTKVIKEDAARFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVSLTDFDLSCLTSSIPQLLIPPSKEKKKHKGQQAPIFVAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMMLGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLHAKQLINRLLHRDPKNRLGSQEGANEIKRHPFFKGVNWALVRTMSPPDLDAPLFGATEEEKEVRIVDPALEELQTDFF 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1219 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Lele11g1219 991 CDD PAS 474 574 IPR000014 -
Lele11g1219 991 FunFam LOV domain-containing protein 659 743 - -
Lele11g1219 991 ProSiteProfiles PAC domain profile. 533 587 IPR000700 -
Lele11g1219 991 SUPERFAMILY Protein kinase-like (PK-like) 645 965 IPR011009 -
Lele11g1219 991 FunFam Putative LOV domain-containing protein 744 958 - -
Lele11g1219 991 MobiDBLite consensus disorder prediction 1 20 - -
Lele11g1219 991 PANTHER FLIPPASE KINASE 1-RELATED 309 964 - -
Lele11g1219 991 ProSiteProfiles PAS repeat profile. 180 251 IPR000014 -
Lele11g1219 991 MobiDBLite consensus disorder prediction 424 445 - -
Lele11g1219 991 FunFam LOV domain-containing protein 448 612 - -
Lele11g1219 991 Pfam PAS domain 482 574 IPR000014 -
Lele11g1219 991 Pfam PAS domain 201 297 IPR000014 -
Lele11g1219 991 SUPERFAMILY PYP-like sensor domain (PAS domain) 201 293 IPR035965 -
Lele11g1219 991 CDD PAS 207 296 IPR000014 -
Lele11g1219 991 MobiDBLite consensus disorder prediction 124 175 - -
Lele11g1219 991 CDD STKc_phototropin_like 658 965 - -
Lele11g1219 991 SMART pas_2 461 530 IPR000014 -
Lele11g1219 991 SMART pas_2 182 251 IPR000014 -
Lele11g1219 991 MobiDBLite consensus disorder prediction 27 89 - -
Lele11g1219 991 Gene3D PAS domain 194 350 - -
Lele11g1219 991 Coils Coil 591 611 - -
Lele11g1219 991 Gene3D Transferase(Phosphotransferase) domain 1 744 957 - -
Lele11g1219 991 ProSiteProfiles PAS repeat profile. 459 532 IPR000014 -
Lele11g1219 991 SMART serkin_6 660 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g1219 991 MobiDBLite consensus disorder prediction 142 165 - -
Lele11g1219 991 MobiDBLite consensus disorder prediction 1 102 - -
Lele11g1219 991 ProSiteProfiles PAC domain profile. 254 308 IPR000700 -
Lele11g1219 991 SMART pac_2 257 299 IPR001610 -
Lele11g1219 991 SMART pac_2 536 578 IPR001610 -
Lele11g1219 991 MobiDBLite consensus disorder prediction 341 379 - -
Lele11g1219 991 ProSiteProfiles Protein kinase domain profile. 660 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g1219 991 FunFam Putative LOV domain-containing protein 194 350 - -
Lele11g1219 991 Pfam Protein kinase domain 663 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g1219 991 Gene3D PAS domain 448 612 - -
Lele11g1219 991 MobiDBLite consensus disorder prediction 341 457 - -
Lele11g1219 991 Gene3D Phosphorylase Kinase; domain 1 659 743 - -
Lele11g1219 991 ProSitePatterns Protein kinases ATP-binding region signature. 666 689 IPR017441 GO:0005524
Lele11g1219 991 SUPERFAMILY PYP-like sensor domain (PAS domain) 475 574 IPR035965 -
Lele11g1219 991 TIGRFAM sensory_box: PAS domain S-box protein 484 574 IPR000014 -
Lele11g1219 991 TIGRFAM sensory_box: PAS domain S-box protein 207 301 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1219 Lele-ChrLele11 19294339 19304191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1219 1 991 AGC Kinase Gene Family AT3G45780 70.323 0.0 1371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele11g1219 Pkinase 1.2e-64 CL0016