Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1216 ATGTGGAAGTGCGGTACGCGTAGGCAAGGTGGGCCCTACCTGCGGGGTCATCGCGTGGGCCCTAGTCAATTGTTCAAGGCGTTGACCGTTTTTGCCCTTTTATTGGGAAGGAGATCGGACGGTTTAGAAGAGCGCGTTAATGTGATCTGGACGCCACCGGCGGATTATACCTTCTACGAAAGACAAAGATACATTGCAGTTGTGAGGCACACACCAGCTCGCACCAAATCAAAGTGCAGCTACCACGCGCCACGGATTATGGGTTGCTTTTGTTTTGCAAAGAAATCAAGCAGAAAATTGCAGGCCAACAACCACAGCCAGAGCGCAAAGACGAACAATCGCACAGATACGGTGAAAGTTGATTCCAATGTGACTGGGGCGAAGGAAGCTCAGTCTAAGGATGATCAACTTTCTCTGGACGTGAAGAGATTGAATTTAACGGACAATGGATCCACTACTGGTAGCACGGCGCAGACTTTTTCTTTCGATGAACTTGCAGCAGCAACAGGAAATTTTAGGTCAGATTGCTTTCTGGGAGAAGGAGGGTTTGGCAAGGTTTACAAGGGGCATTTGCAGAGAATAGACCAGGTTGTGGCTATAAAACAACTCGACCTGAATGGACTTCAAGGAATTCGGGAATTTGTTGTTGAAGTTTTGACACTTAGTCTAGCAGACCACCCTAATCTTGTGAAATTGATTGGGTTTTGTGCTGATGGAGATCAGCGACTATTGGTCTATGAGTACATGCCTTTAGGATCTTTGGAGAACCACTTGCATGATCTTTCACCCGGTAGAAAACCACTTGATTGGAATACGAGAATGAAAATAGCAGCTGGAGCTGCTAAGGGCTTGGAGTATTTACATGAGAAAATGAAGCCTCCTGTCATATACCGCGATTTGAAATGCTCAAACATTTTATTAGGTGAGGGATATCACCCTAAGTTATCTGATTTCGGCTTGGCCAAAGTAGGCCCAAGTGGCGATAAGACACACGTTTCAACAAGGGTTATGGGCACATATGGTTACTGTGCTCCGGATTATGCAATGACTGGTCAGTTGACGTTCAAGTCAGACATATACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCACAGGCAGGAAAGCCATTGATAATACTAGACCTGCCAAAGAACAAAATCTGGTTGCATGGGCAAGGCCGTTGTTCAAAGACAGGAGAAAATTCTCGCAAATGGTAGACCCATTGCTTGAAGGCCAATATCCTGTAAGAGGTTTGTACCAAGCTCTAGCTATTGCTGCCATGTGTGTCCAAGAACAGCCTAATATGCGGCCGGGGATAACCGACGTGGTTACCGCATTAAACTACCTCGCCTCCCAGAGATATGATCCTCAGATTCATCAAGTACAGAACTCCAACAGAAGGGATGGTGATCAAAGACATCATGTTCGTAGTGGTTCTTCCTCAGACAGATCTACAGACTAA 1461 0.4593 MWKCGTRRQGGPYLRGHRVGPSQLFKALTVFALLLGRRSDGLEERVNVIWTPPADYTFYERQRYIAVVRHTPARTKSKCSYHAPRIMGCFCFAKKSSRKLQANNHSQSAKTNNRTDTVKVDSNVTGAKEAQSKDDQLSLDVKRLNLTDNGSTTGSTAQTFSFDELAAATGNFRSDCFLGEGGFGKVYKGHLQRIDQVVAIKQLDLNGLQGIREFVVEVLTLSLADHPNLVKLIGFCADGDQRLLVYEYMPLGSLENHLHDLSPGRKPLDWNTRMKIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTRPAKEQNLVAWARPLFKDRRKFSQMVDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPGITDVVTALNYLASQRYDPQIHQVQNSNRRDGDQRHHVRSGSSSDRSTD 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1216 486 MobiDBLite consensus disorder prediction 461 486 - -
Lele11g1216 486 MobiDBLite consensus disorder prediction 102 132 - -
Lele11g1216 486 SUPERFAMILY Protein kinase-like (PK-like) 158 461 IPR011009 -
Lele11g1216 486 SMART serkin_6 172 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g1216 486 MobiDBLite consensus disorder prediction 465 480 - -
Lele11g1216 486 Gene3D Transferase(Phosphotransferase) domain 1 249 473 - -
Lele11g1216 486 FunFam Serine/threonine-protein kinase PBS1 249 464 - -
Lele11g1216 486 Pfam Protein kinase domain 177 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g1216 486 PANTHER OS07G0668900 PROTEIN 97 458 - -
Lele11g1216 486 ProSitePatterns Protein kinases ATP-binding region signature. 178 201 IPR017441 GO:0005524
Lele11g1216 486 FunFam probable serine/threonine-protein kinase RLCKVII 145 248 - -
Lele11g1216 486 ProSiteProfiles Protein kinase domain profile. 172 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g1216 486 CDD STKc_IRAK 178 447 - -
Lele11g1216 486 Gene3D Phosphorylase Kinase; domain 1 142 248 - -
Lele11g1216 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1216 Lele-ChrLele11 19283065 19286652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1216 87 451 Glycoside Hydrolase AT3G07070 57.995 3.04e-150 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele11g1216 Pkinase 7.6e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1216 09 21085582 21088472 Lele11g1216 11 19283065 19286652 hybridization