Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1212 ATGTTCGATCTTAATTTGAATGCCGATTCGACTGATACCTCTCATAAAGATGAGTCCATAAGGTTCTCCGACGAGCTAACGGAAGCCTCCTGGAATCAAATGGCAAAATCGGGGACTTCCAATTCCTCTAATGTCTATGCTGACGGATCCAACAATGGAGGATATGAGGACTCCTGCTCTACACGCGGTGGGGACGCCTTTACCTTTAATTTCGATATCCTTAAGGAGGAAGGCGGGAAAAAAGTCGCAAACAGGGAGCTATTTCTGTTTAGTGAAACTAAAGGAGTGGACGGCGAGTCTGCAAATTGGCAAGGTCAGGCTTTGTGTGCCCTTCCATCGAGAAAGAACTGGATGAGTCTTTCCTTTGATCATCAGGGTGGTAACGGAGAGATGAAGATGGTCCAGGTTCAGCAACAACCTCAACAGCAAGTGAAGAAAAGCAGAAGGGGTCCAAGGTCTCGGAGCTCGCAGTTCCGAGGGGTAACCTTTTACAGGAGGACTGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAGCAAGTCTATTTGGGTGGGTTTGATACAGCTCATGCCGCTGCCAGGGCCTACGATCGTGCTGCTATTAAGTTTAGGGGAGTCGATGCTGACATCAATTTCAATCTTAATGATTACGAGGAGGATCTTAAGCAGGTATATATATCTTGGGCTATTCGACAGCGAAGTGACAGTCACAATCTTGACCTCAATTTGGGCATAGCAACACCAGGCAGTGGTCCAGAAGAAAATAGGGGCCATCAGTTACAACCTATTCCTTACAACATGCATACTGGAAGAAGTTCAAGGTTTTTCTCTTTGGGAAGTCTTATTTCTTTCATTGAGGTCCTAATAAGGATGGGTTCTCTTAATCTGCAGAAGGAGATCAATGTTGATCCATCGTTGAATAGGCCAGTTGTTACTGAGGAGCGTCCTTTTGTATGGAATGGCATCTATCCTAGTTTCTTTCCTAATGAGGTGAATTTCATTGTCCGGCATATAGATTTTCAATCAGAGTATTATTCTTGTATCTCAGAAAGGGTTGAGAGAATCAGTAGAGATCATTCACTGGGACTGCCTCAGTGGGGTTGGCAAACGCAAGGCCAGGTTACTACAACGCCAGTACCACCATTCTCTACTGCAGCATCATCAGGATTCTCAATTTCGGCTACCTTTCCATTGGCTACCATCTATAGCTCAATTCCCCATAATATCGGTTTTGACCCATCTAGTGCAGCAGCTGGCAGCAACACAACTCAACATTGCCGGATGAAGCCCCCGCACGCGCCCCACTAG 1308 0.461 MFDLNLNADSTDTSHKDESIRFSDELTEASWNQMAKSGTSNSSNVYADGSNNGGYEDSCSTRGGDAFTFNFDILKEEGGKKVANRELFLFSETKGVDGESANWQGQALCALPSRKNWMSLSFDHQGGNGEMKMVQVQQQPQQQVKKSRRGPRSRSSQFRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLNDYEEDLKQVYISWAIRQRSDSHNLDLNLGIATPGSGPEENRGHQLQPIPYNMHTGRSSRFFSLGSLISFIEVLIRMGSLNLQKEINVDPSLNRPVVTEERPFVWNGIYPSFFPNEVNFIVRHIDFQSEYYSCISERVERISRDHSLGLPQWGWQTQGQVTTTPVPPFSTAASSGFSISATFPLATIYSSIPHNIGFDPSSAAAGSNTTQHCRMKPPHAPH 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1212 435 CDD AP2 157 212 IPR001471 GO:0003700|GO:0006355
Lele11g1212 435 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Lele11g1212 435 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 128 223 - -
Lele11g1212 435 MobiDBLite consensus disorder prediction 416 435 - -
Lele11g1212 435 SMART rav1_2 157 219 IPR001471 GO:0003700|GO:0006355
Lele11g1212 435 MobiDBLite consensus disorder prediction 138 157 - -
Lele11g1212 435 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Lele11g1212 435 FunFam AP2-like ethylene-responsive transcription factor 156 215 - -
Lele11g1212 435 Pfam AP2 domain 157 205 IPR001471 GO:0003700|GO:0006355
Lele11g1212 435 Gene3D AP2/ERF domain 156 215 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1212 Lele-ChrLele11 19242351 19246319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1212 1 397 AP2-EREBP Transcription Factor Family AT5G60120 37.303 8.66e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele11g1212 AP2 1.1e-09 CL0081