Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1208 ATGGTTTCCTCGAAAATGGAACAGTTCATTGATAACATGCCGCCAATGGATCTGATGCGTTCGGAGAAGATGACCTTCGTTCAACTCATCATCCCCGTCGAGTCCGCTCACCGTGCCGTCACTTATTTGGGCGAACTCGGCCTCTTCCAATTCCAAGATTTAAATGATGATAAAAGCCCTTTCCAGAGAACGTTTGTTAATCAGGTCAAGCGATGTGCAGAAATGTCGAGAAAGTTACGATTCTTTAAAGATCAAATCAGTAAAGCTGGTCTTATGTCTTTTCCTCATCCTGTTCTGCAACCAGATATTGAGTTGGAGGAACTTGAGTATAAACTTGCTGAGCATGAGCATGAGCTAATTGAACTGAACTCTAACAGCGAGAAACTTCGTCAGTCATATAATGAGCTCCTGGAGTTTAAGATTGTTTTGCAGAAGGCATGTAGTTTTCTAGCCTCAAATCATAGCCATGAATTTTCAGAGAGGGAGCTGGAGGAGAATGTATACTCAAATGATGATCATGTTGACACTGGATCTATACTTGAGAAGGATTTGAAGCTTGGATCATCATATCAATCTGGTTTAAGATTCATCAGCGGAATAATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGGGCTACAAGAGGTAATATGCTTTTCAATCAGGCTGCAGTTGATGAGCTAATAGAGGATCCTGTTTCAAATGAGAAGATAGAAAAAACAGTGTATGTCGTGTTTTTCTCTGGGGAGCAGGCAAGAATAAAGATTCTTAAAATCTGTGAGGCATTTGGTGCAAATTGCTACCCTGTCCCTGAAGATATAAGTAAGCAAAGACAAATAAGTAGGGAGGTCTCATCACGTCTTTCTGACTTAGAGGTGACTCTGGATGCTGGTCTTAGGCACCGAAATAAGGCCCTTTCTTCTGTGGAGAGTCACCTGGCAAAATGGATGGACATGATAAGAAGAGAGAAGGCTGTGTATGATACCCTGAACATGTTAAATTTTGACGTCACAAAAAAATGTCTCGTTGGAGAGGGTTGGTGCCCTGTATCTGCAACAACGCAGATTCAGGAGGCACTGCAGCGTGCAACTTTAGATAGCAGCTCTCAAGTTGGCATAATCTTCCACCCAATGGATGCAGTGGAATCACCACCCACATATTTTAGGACCAACCGCTTTACTAGTGCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACGAGGAAGCAAATCCTGCGGTTTACACAGTTATTACATTCCCATTTCTTTTTGCCGTAATGTTTGGGGACTGGGGTCATGGAATTTGCTTGTTGCTGGGGGCATTTGTTCTTATAGCACGTGAAAGCAGGCTCAATAAGCAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGTTATGTGCTTCTTTTGATGTCTTTGTTTTCAATCTATTGCGGGTTAATCTACAATGAATTCTTCTCTGTGCCTTTTCACATTTTTGGAAAGTCTGCTTACACATGCCGAGATGCTTCGTGCAGGGATGCACATACTGCTGGCTTAGTCAAATCACGAGATACATACCCATTTGGTGTGGACCCCTGCTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTCAACTCTCTCAAGATGAAGATGTCCATTCTTTTAGGTGTGGCGCAGATGAACTTAGGGATTATATTAAGTTACTTCAATGCGCATTATTTTAGCAGCTCAGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTTCTGAACAGTCTGTTTGGGTATCTTTCTCTTCTCATTGTCGTAAAGTGGTGCAATGGTTCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTTCTTAGCCCCACTGATAATCTTGGGGAGAATCAGTTGTTCTGGGGCCAAAGGCCACTTCAAATTGTGTTATTACTTTTGGCTTTAATCGCAGTTCCTTGGATGCTGTTTCCAAAACCCTTTATCCTAAAGAAGCTCCACCATGAGAGATTCCAAGGACGTGCTTATGGTATGCTTACTAACACTGAGATGGACCTCGAGGAAGAACCAGATTCTGCCAGGCAACATCATGAGGAATTCAATTTCAGTGAGGTCTTTGTTCATCAAATGATCCACTCTATTGAATTTGTTCTAGGCGCTGTTTCAAATACTGCATCATATCTTCGACTTTGGGCATTAAGCTTGGCCCACTCAGAGCTTTCAACTGTTTTTTATGAGAAAGTACTACTTCTTGCATGGGGGTATGACAATCTTGTTATCCGGATAGTGGGGCTAGTCGTTTTTGCCTTTGCAACTGCCTTTATTCTTCTCATGATGGAAACCCTCAGCGCTTTTCTTCATGCCCTGCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTACTATGGCGATGGCTACAAGTTCAGACCTTTTTCCTTTGCCTCGTTAACGGAGGATGATGATTGA 2472 0.4211 MVSSKMEQFIDNMPPMDLMRSEKMTFVQLIIPVESAHRAVTYLGELGLFQFQDLNDDKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLMSFPHPVLQPDIELEELEYKLAEHEHELIELNSNSEKLRQSYNELLEFKIVLQKACSFLASNHSHEFSERELEENVYSNDDHVDTGSILEKDLKLGSSYQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAAVDELIEDPVSNEKIEKTVYVVFFSGEQARIKILKICEAFGANCYPVPEDISKQRQISREVSSRLSDLEVTLDAGLRHRNKALSSVESHLAKWMDMIRREKAVYDTLNMLNFDVTKKCLVGEGWCPVSATTQIQEALQRATLDSSSQVGIIFHPMDAVESPPTYFRTNRFTSAYQEIVDAYGVARYEEANPAVYTVITFPFLFAVMFGDWGHGICLLLGAFVLIARESRLNKQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGKSAYTCRDASCRDAHTAGLVKSRDTYPFGVDPCWRGSRSELAFLNSLKMKMSILLGVAQMNLGIILSYFNAHYFSSSVDIRYQFVPQMIFLNSLFGYLSLLIVVKWCNGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKLHHERFQGRAYGMLTNTEMDLEEEPDSARQHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRIVGLVVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYYGDGYKFRPFSFASLTEDDD 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1208 823 PIRSF ATP6V0A1 14 823 IPR026028 GO:0000220|GO:0046961
Lele11g1208 823 Pfam V-type ATPase 116kDa subunit family 42 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele11g1208 823 PANTHER VACUOLAR PROTON ATPASES 18 822 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele11g1208 823 Coils Coil 105 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1208 Lele-ChrLele11 19201607 19210665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1208 6 816 Primary Pumps ATPases(2) AT2G28520 77.178 0.0 1308
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1206 09 21005612 21020279 Lele11g1208 11 19201607 19210665 hybridization