Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1201 ATGGTTTCTCAAATCAAGTGGGCTGCAGAAAGTGATAAAGGCAAAAGCTTTAATAAAACCTGTGCAATTTGTTTTGAAGATTCTGATGTTGAAAAAATATTTTCAGTGGACCGTTGCTTGCATAGATATTGTTTTTCATGTATGAAACAGCATGTGGAGGTGAAGCTGCTTGATGGGATGATGGCAGAGTGCCCTCATGAAGGTTGTAAATCTGAGGTGACTGTTGATAGATGCAAAAACATTTTAGCACCACAATTAGTTGAAGTTGTCAACGAAAGGATTAAGGAATCAGCTGTCCCTGTCCTCATGAACTGTTATGACTATAAAAATCCCATTCTTTTTCGTCATGAAGAAGATTCTAAGCTGGAGTTTCTTGCCTCCATGAAACTGTGGCGACAGGGTGTGAAGTGCAATCACATAATTGAACTAGCTGAAGGTTGCTATCATATTACCTGCAGACTCAACATTCAACCTGTGAAAGCCTACTTTATGGTATTGCTTTTTGTAGATGTGGGTATGAATTTTGCTACACATGTGGAGCAAGGTGGGAGAACAAGAAAGCAACATGCTCTTGTCCAATCTGGGAGCGTAACATTATACACGATCCACATGAAGGAAGATGATCATTATACCTGTGCTAACTTCCTTTGTCCCCCCACTGCTCCGAGAAAGGTTACATTGTTTAGATTCTGTTTCAATGCTTCGGTGTTGACTACGTTCTCTTGCAAGCATGTTCTAGTTTTGATGAGAATTTTCAATTAG 762 0.3963 MVSQIKWAAESDKGKSFNKTCAICFEDSDVEKIFSVDRCLHRYCFSCMKQHVEVKLLDGMMAECPHEGCKSEVTVDRCKNILAPQLVEVVNERIKESAVPVLMNCYDYKNPILFRHEEDSKLEFLASMKLWRQGVKCNHIIELAEGCYHITCRLNIQPVKAYFMVLLFVDVGMNFATHVEQGGRTRKQHALVQSGSVTLYTIHMKEDDHYTCANFLCPPTAPRKVTLFRFCFNASVLTTFSCKHVLVLMRIFN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1201 253 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 13 98 IPR031127 GO:0004842|GO:0016567
Lele11g1201 253 ProSiteProfiles Zinc finger RING-type profile. 21 65 IPR001841 -
Lele11g1201 253 SUPERFAMILY RING/U-box 19 100 - -
Lele11g1201 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 100 IPR013083 -
Lele11g1201 253 ProSitePatterns Zinc finger RING-type signature. 39 48 IPR017907 -
Lele11g1201 253 FunFam RBR-type E3 ubiquitin transferase 16 101 - -
Lele11g1201 253 Pfam Zinc finger, C3HC4 type (RING finger) 21 65 IPR018957 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1201 Lele-ChrLele11 19160437 19161491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1201 1 153 C3H Transcription Factor Family AT2G19610 21.801 6.58e-10 57.0