Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1173 ATGTTTTGGAAGCTCGCTTCTTTATCTGTCCCCTCTCCTGTGGAGGCAATATTAGACCAGGAGAATTTCACTTTGGAAGAGCTTCTGGATGAAGAGGAAATAATTCAAGAATGCAAGGCCTTAAACAGTCGCCTCATTAACTTAGCTCAGGTTGAGCAATTGCTACGCTACATTGTAGAAGAACCACCAGAAAATGCTGAAAGCAAGCGGGCCCTCAAGTTTCCTTTCATTGCCTGTGAGATTTTTACTTGTGAAATTGATGTTATTTTGAAGACCTTGGTGGAGGAAGAAGAGTTAATGAACTTACTATTCTCCTTCCTGGAGCCGAACCGTCCTCATAGCACCTTGCTGGCTGGGTACTTTAGCAAGGTTGTTGTTTGCCTAATGATTAGGAACACTCTGCCTCTTATGAATTATGTTCAAGCCCATCAGCATGTTTTTCAGCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGCGCTGATGACCATGTGTATCCCAACTTTATAGATGTGATACAATGGTTGGTTGAGAGCAACCTGCTAGAGATGATCATTGATAAATTAAGCCCATCTAGTCCTCCTGAAGTTCATGCTAATGCAGCTGAAACATTGTGTACAATAACTCGAAATGCCTCGTCTGCTCTAGCAACTAAACTTTCAAGCCCAAGTTTTGTGGCAAGAATTTTGGATCATGCTTTGGAATATTCACAATCAAAGTCTAGCCTCATTTGCTCTCTCTCTGTGTTTATTTCTTTGCTGGATTCCAAAAGATCTGCAAGCTCGTCTTCCCTTTTTCATTCTTTCCGAAGTCAATACATGTATGAGGCTCCAGTTCCTGTTAACCAAGAGACTATTGGTGCAATGCTTCAGAAACTTAGTGACTTGTTTAAGCTTTTGCATGTATCATCCGATGAAAATGTATTGCCTACAACATATGGAGAATTGAGGCCTCCACTTGGGAAGCATCGATTAAAGATAGTTGAGTTTATTGCAGTACTTTTGAAAGCTGGGAATGAATTGGCTGAAGTAGAATTGGTCAACTCAGGAATCATTCAACGAGTTATTGATCTTTTCTTTGAATATCCATTCAATAACTTATTACACCATCATGTAGAAAGTATAATGCTGTCATGTTTGGAGAGCAAAACTGATGTCGTTGTCGATTATCTTCTTCGAGAATGTGATATAATTGGAAAAGTTCTTCGAGCAGATAAAAATCCTGTTTTTTATAGTTATGGCGACCAGCCAACAGTAGCTGCTGCTGGCAAACAGGCACCACGGGCAGGAAACATTGGACATATCACTCGATTTGCCAACAAACTTGTTAACCTGGCTCCTAACCAAAGCTGCATACAGGCCTTTCTTCAGGAAAACAACGAGTGGAATGAATGGCAAGCTACAGTTCTACAAGAGTGTAATGTGGTTGAGAATGTTCATCGTTGGGCTTGTGGACGACCCACTGCATTACAAGATAGGATGAGGGATAGTGATGATGATGACCTTCATAATAGAGACTACGATGTTGCAGCATTAGCCAATAATCTGAGCCAAGCTTTTAAATACAAAATTTATGGAAATGAGGATAATGAAGAGGACCACGGAGGGCATGGTGGAGATGATGAGGATGTCTACTTTGATGATGATTCTGCTGAAGTAGTCATATCATCTCTAAGACTTGGTGATGAACAAGGAAGCCTTTTTACAAACTCCAACTGGTTTGCGTTCCAAGATGACAGAAATGGTAATGCACCAGAGGGAGCATCATCTGAGATGATGGATGAGATTAACTTGAATGGAGCGACAAATGGTGGTAACAACAGTAGTGATGATGAGGTAGTGGTAGGGGAGGAAGAGGAATTGGCTGAAAGCAGAAATACCACAAATGACTCCTCTAACATGAGTACGAACTTCTTCAGGGGATCAAGCAACGGCAAGTCAATGAATGGTGGCACTCTAAACTCGGAAAGTGAGAAGGCAGGTGCTGCACATGATATGGGATTTTTCAGGTTTGAGGCATCTGAAAACGTGGACCTTTTTGGGGATAGGCCATTACCTGACTGGGTGGGATGGGCTGAACCATCAGATATGAAAGTTTCTGGTTCAAGCACAAATCCCTTTGTTGATCATGATGATTCTGATAGCAATATATCCACTAAATCTCAATTAGGCACCCCCAGTTCTTGTTCACCTTCAAATGGGGAATTCCCACCTGCAAATGGTTTGCCAACCCGGGGAGGGGACTCGAGTCAAAGATCAGCGGCAGTACCCTCCCGTTTTGAAGGGGATGTTGAATTTGTTGGCGTGGAATTAGAAGGTACTGAGAAAGCCATGGAGCAGGCTCTCAAAGAAGGAATAGTCGGGGAAGCAGGACCACTGAAAAGAAATGTTGTTCCGAAACTGCCAGAAAAGGATAACTCCGAAGAGGGCGGACCCGGAATGAAGGAATTCAACGACGCAAATTACTGGAGGGTTGATCAAGAGGTTGCTGTTCTGGAGTGA 2526 0.424 MFWKLASLSVPSPVEAILDQENFTLEELLDEEEIIQECKALNSRLINLAQVEQLLRYIVEEPPENAESKRALKFPFIACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSTLLAGYFSKVVVCLMIRNTLPLMNYVQAHQHVFQQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVIQWLVESNLLEMIIDKLSPSSPPEVHANAAETLCTITRNASSALATKLSSPSFVARILDHALEYSQSKSSLICSLSVFISLLDSKRSASSSSLFHSFRSQYMYEAPVPVNQETIGAMLQKLSDLFKLLHVSSDENVLPTTYGELRPPLGKHRLKIVEFIAVLLKAGNELAEVELVNSGIIQRVIDLFFEYPFNNLLHHHVESIMLSCLESKTDVVVDYLLRECDIIGKVLRADKNPVFYSYGDQPTVAAAGKQAPRAGNIGHITRFANKLVNLAPNQSCIQAFLQENNEWNEWQATVLQECNVVENVHRWACGRPTALQDRMRDSDDDDLHNRDYDVAALANNLSQAFKYKIYGNEDNEEDHGGHGGDDEDVYFDDDSAEVVISSLRLGDEQGSLFTNSNWFAFQDDRNGNAPEGASSEMMDEINLNGATNGGNNSSDDEVVVGEEEELAESRNTTNDSSNMSTNFFRGSSNGKSMNGGTLNSESEKAGAAHDMGFFRFEASENVDLFGDRPLPDWVGWAEPSDMKVSGSSTNPFVDHDDSDSNISTKSQLGTPSSCSPSNGEFPPANGLPTRGGDSSQRSAAVPSRFEGDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNVVPKLPEKDNSEEGGPGMKEFNDANYWRVDQEVAVLE 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1173 841 SUPERFAMILY ARM repeat 98 557 IPR016024 -
Lele11g1173 841 MobiDBLite consensus disorder prediction 805 828 - -
Lele11g1173 841 Pfam SIT4 phosphatase-associated protein 127 348 IPR007587 GO:0019903|GO:0043666
Lele11g1173 841 Pfam SIT4 phosphatase-associated protein 352 486 IPR007587 GO:0019903|GO:0043666
Lele11g1173 841 MobiDBLite consensus disorder prediction 806 820 - -
Lele11g1173 841 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 802 IPR007587 GO:0019903|GO:0043666
Lele11g1173 841 MobiDBLite consensus disorder prediction 705 767 - -
Lele11g1173 841 MobiDBLite consensus disorder prediction 705 745 - -
Lele11g1173 841 MobiDBLite consensus disorder prediction 604 667 - -
Lele11g1173 841 MobiDBLite consensus disorder prediction 604 618 - -
Lele11g1173 841 MobiDBLite consensus disorder prediction 634 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1173 Lele-ChrLele11 18958216 18967432 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1173 11 18958216 18967432 Lele29g0238 29 1377173 1378879 CCT
Lele11g1173 11 18958216 18967432 Lele30g1170 30 14611917 14613701 CCT
Lele11g1173 11 18958216 18967432 Lele31g1311 31 19184351 19186058 CCT
Lele11g1173 11 18958216 18967432 Lele32g0225 32 1346909 1348711 CCT
Lele29g0230 29 1330317 1331904 Lele11g1173 11 18958216 18967432 CCT
Lele30g1180 30 14656876 14658931 Lele11g1173 11 18958216 18967432 CCT
Lele09g1170 09 20781131 20790113 Lele11g1173 11 18958216 18967432 hybridization
Lele10g1145 10 22756102 22766959 Lele11g1173 11 18958216 18967432 hybridization