Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1155 ATGATCAGTTTGGACAGGGGTCTCTCTAGTCCTCCAGCTCCGGCGAACCCAATTCCTACTGAATCCATTGATACCAAAATACCAGTTGGTTGCGTCGGCGGAGGCGGCAACAAGAATGACCGTCGTTGCTCCAAAGTTGATGGGCGAGACCGTCGTGTCCGTTTGCCGAAGTTGTGCGCTGCTCGCGTCTTCCAGCTCACACGTGAGCTGGGAAACAAGAATCATGGGCAGACCATTGAGTGGCTCTTGCGCCAGGCGGAGCCGTCCATTATCGCCGCCACTGGTAGTGGTGTCTCGTCCAACTCCCCCATCGCTTCGTCGGACTTGGTAACTGCTGAACCACCCAGCGAGGGCAACAAAGCTCTTGGGGAAGGGACAGATTTTGTGGCGGAAGGTGAACAACAAGGTCTGCCACCACTGGATTTAGATTTCTGGGCAGGCTTAGACATGGAGTTTTATGGCAATGAGGTTGCAATGTTCCATTAA 486 0.5391 MISLDRGLSSPPAPANPIPTESIDTKIPVGCVGGGGNKNDRRCSKVDGRDRRVRLPKLCAARVFQLTRELGNKNHGQTIEWLLRQAEPSIIAATGSGVSSNSPIASSDLVTAEPPSEGNKALGEGTDFVAEGEQQGLPPLDLDFWAGLDMEFYGNEVAMFH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1155 161 MobiDBLite consensus disorder prediction 1 45 - -
Lele11g1155 161 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 40 109 IPR005333 GO:0003700
Lele11g1155 161 MobiDBLite consensus disorder prediction 96 118 - -
Lele11g1155 161 ProSiteProfiles TCP domain profile. 38 93 IPR017887 -
Lele11g1155 161 MobiDBLite consensus disorder prediction 96 113 - -
Lele11g1155 161 Pfam TCP family transcription factor 41 107 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1155 Lele-ChrLele11 18823056 18823541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1155 13 122 TCP Transcription Factor Family AT5G08330 53.636 1.22e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele11g1155 TCP 2.4e-23 No_clan