Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1151 ATGGCTGAGATTGAGGGATTTCCAGGAAGCTCCATGCATGGAGTCACCGGCAGAGAGCAAACCTTCGTAGCCTCCGTGGCTTCCCCGATGGTCCCTTCCGACCACACTGCCAATTTCGCTCTCCCCGTTGATTCTGAGCACAAAGCTAAAGTCTTTAAGCTCTTCTCTTTTGCCAATCCCCACATGAGAACCTTCCACCTCTCCTGGATTTCCTTCTTCACTTGCTTCGTCTCAACCTTCGCGGCGGCCCCTTTGGTTCCCATAATCCGTGACAACCTTAACCTTACCAAGTACGACGTCGGGAACGCGGGAGTCGCCTCCGTCTCCGGCAGTATCTTCTCCAGGCTTACGATGGGTGCAGTTTGTGACCTCTTAGGTCCACGTTACGGCTGTGCCTTTCTCATCATGCTCACCGCGCCAACGGTGTTCTGCATGTCGTTTGTGCAAGATGCCTCTGGTTACATAGCGATACGGTTCATGATAGGGTTCTCGTTGGCCACTTTTGTGTCGTGTCAGTACTGGATGAGTACTATGTTTAACAGTAAGATCGTAGGGCTTGCGAACGGGACGGCGGCAGGGTGGGGCAACATGGGAGGTGGGGCCACTCAGCTTATAATGCCATTGGTATATGAATTGATCAAAAGAGCTGGATCTACCCCTTTTGTTGCCTGGAGAATCGCCTTCTTCGTCCCTGGTTGGATGCATGTCATCATGGGAATCCTCGTTTTGACCCTCGGTCAAGACCTGCCCGATGGCAACCTCGGTGCTTTGCAGAAGAAGGGTAGTGTCGCCAAGGACAAGTTCTCCAAGGTGTTGTGGTATGCGATAACGAATTACAGGACATGGATTTTTGCTCTATTGTACGGGTACTCTATGGGAGTTGAATTGACCACTGATAATGTGATCGCTGAATATTTCTATGATAGGTTCAATCTGAAGTTACACACCGCTGGAATCATTGCCGCTTCGTTCGGAATGGCTAACTTCATTGCTCGTCCTTTTGGCGGCTACACTTCCGATCTTGCTGCTCGTTTATTTGGGATGAGAGGAAGGCTTTGGAACCTCTGGATTCTTCAAACTTTAGGAGGAGTTTTCTGTATATGGCTGGGACGGGCCAATTCTCTTCCCATTGCCATCGTCGCCATGATTCTATTCTCCATCGGAGCTCAATCTGCTTGCGGTGCAACTTTCGGCATCATCCCTTTCATCTCAAGGCGGTCTCTGGGCATCATCTCGGGTTTAACTGGGGCAGGGGGGAACTTCGGGTCGGGGCTAACCCAGTTGGTCTTCTTCTCGACCTCAAGTTTCTCCACCTCGGCGGGTCTGTCGTGGATGGGTGTTATGATAGTGGCCTGCACACTTCCGGTGACTCTGGTTCACTTCCCTCAGTGGGGAAGCATGTTCCTTCCTCCAACTAAAGACGTTGACAAGTCAACAGAAGAGTACTATTATGCATCTGAATGGAACCAAGAGGAGAGAGAGAAGGGTTTGCACCAGCAGAGTCTCAAGTTCGCAGAGAACAGCCGTTCCGAGAGAGGCAAGCGAGTAGCCTCTGCTCCGACGCCACCTAACACAACTCCGACTCATCAAGTTTAA 1596 0.5107 MAEIEGFPGSSMHGVTGREQTFVASVASPMVPSDHTANFALPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKYDVGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVQDASGYIAIRFMIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYELIKRAGSTPFVAWRIAFFVPGWMHVIMGILVLTLGQDLPDGNLGALQKKGSVAKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANFIARPFGGYTSDLAARLFGMRGRLWNLWILQTLGGVFCIWLGRANSLPIAIVAMILFSIGAQSACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSSFSTSAGLSWMGVMIVACTLPVTLVHFPQWGSMFLPPTKDVDKSTEEYYYASEWNQEEREKGLHQQSLKFAENSRSERGKRVASAPTPPNTTPTHQV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1151 531 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Lele11g1151 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Lele11g1151 531 SUPERFAMILY MFS general substrate transporter 58 460 IPR036259 -
Lele11g1151 531 MobiDBLite consensus disorder prediction 490 513 - -
Lele11g1151 531 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 516 IPR044772 GO:0015112
Lele11g1151 531 FunFam Nitrate transporter 2.1 265 466 - -
Lele11g1151 531 MobiDBLite consensus disorder prediction 490 531 - -
Lele11g1151 531 FunFam High affinity nitrate transporter 57 254 - -
Lele11g1151 531 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Lele11g1151 531 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Lele11g1151 531 Gene3D MFS general substrate transporter like domains 57 253 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1151 Lele-ChrLele11 18779524 18781333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1151 1 529 Inorganic Solute Cotransporters AT5G60770 81.096 0.0 903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0266 29 1568430 1570732 Lele11g1151 11 18779524 18781333 CCT
Lele30g1147 30 14414315 14417050 Lele11g1151 11 18779524 18781333 CCT
Lele09g1150 09 20590385 20592194 Lele11g1151 11 18779524 18781333 hybridization
Lele10g1120 10 22568375 22569455 Lele11g1151 11 18779524 18781333 hybridization