Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1150 ATGGAAGAAATACAATCTCAATCGGATCATTATAGATCTTCATCTTCATCAGTGAGTAGCCCAGCAAGTAGGGTTCCATCAAGTAACTTCTTCTACCTGCGTAAACCCGGTTCACTCAGACAACCAATCTCGTTTGAGGATTCACCTGAGTGGGATGATACTGATACTGACGTTAGGATCGAAGGAGGTGATTCTATTCATGTTGCTACTGCACCAGTTTCCCCTTCTCTTTCAAAGCTCAACAGTGAGTCCTTGCCATCCCCACATCTACCTGAAGGTCCAGCAGTTCCACGAAAAGTTGCAGGAGCTTCCATTATGTGGAAGGACTTGACTGTGACAATAAAGGGAAAAAGGAAATACTCTGATAGGGTTGTTAAGAGTTCAACTGGCTATGCCTTACCTGGGACAATGACGGTAATCATGGGTCCAGCTAAATCAGGGAAATCTACACTATTACGGGCTATTGCAGGAAGATTGCATCCTTCTGCAAGGATTTACGGGGAAGTGTTTGTGAATGGAGTAAGATCAGACATGCCTTATGGATCATACGGTTATGTGGAGAGAGAAACCACTCTAATTGGGGCCCTCACTGTGCGAGAATTTCTATACTATTCAGCCCTGCTTCAACTTCCTGGTTTCTTTTGTCAGAAAAAGAATGTGGTTGGGGATGCCATTCATGCAATGTCTTTGGGGGATTATGCTAATAAACTTATTGGTGGACATTGCTACATGAAGGGCCTTTCAAGTGGGGAGAGAAGGCGGGTTAGCATTGCCAGGGAGCTGGTGATGAAGCCACATATCTTATTTATAGATGAGCCCCTTTATCATCTAGACAGTGTCTCAGCACTTTTGATGATGGTTACATTGAAGAAACTTGCAAGCACTGGTTATACTCTTATTTTCACCATCTATCAGAGTAGTACAGAAGTCTTTGGCCTTTTTGATCGAATCTGTCTGCTTTCTAATGGAAATACACTGTTCTTTGGAGAAACATTAGCTTGCTTGCAGCACTTCTCAAATGCTGGATTTCCTTGCCCTATCATGCAAAGTCCTTCTGATCACTTTCTCCGTGCAATTAATACAGATTTTGACAGGATAATTGCAATGTGCAAAAACTGGCAGGATGACAATGGGGAGTTTTCTTCTGTAAACATGGACACTGCTGTAGCTATACGTACACTTGAAGCAACGTATAAATCATCTGCAGATGCAGCTGCTGTTGAAACTATGACTTTGAAACTTATTGAGAAGGAAGGTCCAGCTCTCAAAAGCAAAGGCAAAGCTAGTATTGCTACACGAATTGCTGTCTTGACATGGAGATCATTATTAGTTATGTCAAGGGAGTGGAAATACTATTGGCTCCAACTTATTCTTTATATGCTTCTCACACTCTGTATTGGGACTGTGTTTTCTGGTTTGGGCCATACTCTGTCCTCAGTTGTGACTAGAGTTGCGGCAATTTTTGTATTTGTATCATTCTGCTCCCTTCTAAGCATTGCTGGCGTGCCTTCACTTTTGAAAGAAATCAAGATATATGCCTGTGAAGAATCGAACCAGCACTCTGGTGCATTAGCATTTTTACTTGGGCAACTCCTCTCCAGCATCCCTTTCCTATTTCTCATCTCCATTTCATCGAGCCTCATGTTCTATTTCCTAGTAGGGCTGCGAGACGAGTTTAGCTTGCTGATGTACTTTGTGCTCAACTTTTTCATGTGTCTGTTAGTGAATAATGGACTTGTGCTAGCCATTGCTTCTCTATGGCAAGATGCCTTCTGGAGTGTTTTGACCCTGCTGTGCATACATGTGGTCATGATGCTTTCTGCTGGTTATTTTAGAATTCGAAATGCTTTGCCTGGACCAGTGTGGATGTATCCAATATCCTATATATCCTTTCATACATACTCTATTCAGGGTCTTTTGGAGAATGAGTACCTAGGGACGTTTTTTGCTGTTGGGCAGGTAAGGAGCATATCTGGGTTTCAAGCCCTCCAAAGTGCGTATAACATCTCCGGCGACAACAATTCAAAGTGGGAGAATTTACTGGTTTTGTTTCTCATGGCAGTTGGTTATCGTATTATCGTGTTTGTTTTATTACGTTTTTGCGTGGGGAGAAAAACATCCCTCCTTAAAAGTTTTCCATGTTGTAATCGGGATACAACAAATATATAA 2169 0.4205 MEEIQSQSDHYRSSSSSVSSPASRVPSSNFFYLRKPGSLRQPISFEDSPEWDDTDTDVRIEGGDSIHVATAPVSPSLSKLNSESLPSPHLPEGPAVPRKVAGASIMWKDLTVTIKGKRKYSDRVVKSSTGYALPGTMTVIMGPAKSGKSTLLRAIAGRLHPSARIYGEVFVNGVRSDMPYGSYGYVERETTLIGALTVREFLYYSALLQLPGFFCQKKNVVGDAIHAMSLGDYANKLIGGHCYMKGLSSGERRRVSIARELVMKPHILFIDEPLYHLDSVSALLMMVTLKKLASTGYTLIFTIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGEFSSVNMDTAVAIRTLEATYKSSADAAAVETMTLKLIEKEGPALKSKGKASIATRIAVLTWRSLLVMSREWKYYWLQLILYMLLTLCIGTVFSGLGHTLSSVVTRVAAIFVFVSFCSLLSIAGVPSLLKEIKIYACEESNQHSGALAFLLGQLLSSIPFLFLISISSSLMFYFLVGLRDEFSLLMYFVLNFFMCLLVNNGLVLAIASLWQDAFWSVLTLLCIHVVMMLSAGYFRIRNALPGPVWMYPISYISFHTYSIQGLLENEYLGTFFAVGQVRSISGFQALQSAYNISGDNNSKWENLLVLFLMAVGYRIIVFVLLRFCVGRKTSLLKSFPCCNRDTTNI 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1150 722 Pfam ABC transporter 134 274 IPR003439 GO:0005524
Lele11g1150 722 Pfam ABC-2 type transporter 434 644 IPR013525 GO:0016020|GO:0140359
Lele11g1150 722 MobiDBLite consensus disorder prediction 73 95 - -
Lele11g1150 722 ProSitePatterns ABC transporters family signature. 247 261 IPR017871 GO:0005524|GO:0016887
Lele11g1150 722 Gene3D - 99 342 IPR027417 -
Lele11g1150 722 MobiDBLite consensus disorder prediction 8 26 - -
Lele11g1150 722 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 100 701 - -
Lele11g1150 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 341 IPR027417 -
Lele11g1150 722 FunFam ABC transporter G family member 3 98 342 - -
Lele11g1150 722 SMART AAA_5 134 324 IPR003593 -
Lele11g1150 722 CDD ABCG_EPDR 102 329 - -
Lele11g1150 722 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 105 347 IPR003439 GO:0005524
Lele11g1150 722 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1150 Lele-ChrLele11 18764876 18770161 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1147 09 20575308 20580603 Lele11g1150 11 18764876 18770161 hybridization
Lele10g1117 10 22546402 22557716 Lele11g1150 11 18764876 18770161 hybridization