Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1149 ATGGCCAAACTCAGAAGTAGCAGCAGTAAAAAGAAAGGTGGGATCGTGAAGCTGAAGTTTGTGGTAGAGAAGATCCAAAAGAAGCTGTTACCGGGTACGAAATCGAGTTCTTCATATCGAGACGCATGCGAAGAAGGTAGTGATGAGTCGAGCTATGTCCCAGAAGATGTGAAAGAAGGGCATTTTGCAGTGATTGCTGAAGATGGAGAGGAGCCAAGGAGATTTGTGGTGCCACTAAGCTGTTTAACACACCCATCGTTTTTGAGGTTATTGGACGAAGCAGCGGAAGAATATGGGTTTGATCAAGAAGGTGCACTAACCATTCCTTGCAGCCCGAGAGAACTTGAGAGGATATTGGAGGGAAACTGTGAAAGTGATGCATCAGTTAGCTGGAATGTTTGTAAACCCATGGTTCAAACCTACTCTTGA 429 0.4499 MAKLRSSSSKKKGGIVKLKFVVEKIQKKLLPGTKSSSSYRDACEEGSDESSYVPEDVKEGHFAVIAEDGEEPRRFVVPLSCLTHPSFLRLLDEAAEEYGFDQEGALTIPCSPRELERILEGNCESDASVSWNVCKPMVQTYS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1149 142 Pfam Auxin responsive protein 40 120 IPR003676 GO:0009733
Lele11g1149 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 118 IPR003676 GO:0009733
Lele11g1149 142 MobiDBLite consensus disorder prediction 31 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1149 Lele-ChrLele11 18761280 18761708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1149 20 110 Calmodulin-binding Proteins AT5G20810 43.956 1.02e-15 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1146 09 20571236 20571670 Lele11g1149 11 18761280 18761708 hybridization
Lele10g1116 10 22533342 22533776 Lele11g1149 11 18761280 18761708 hybridization