Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1114 ATGGCTTTCACTTGGTCCCGCTTGCTTCTTTCTCGCTCTTCACCCTCCAACTACTCCATCTTCTCCGATCTTACCCTAGCTCGCTCTGGTGACTTGGTATGTCCCACATTTTCTGCTTTAGTCCACCGAAGCAACATCTCCGTTGAGCCTCCATTTACTCCTCTCACAATCAAGCTTTTGACGCCCAGAATCCAAGTTCAATACTGCGCCAAATCCACGGGGGAGGAGCAGCGGACTTCGGCGGAAACTGCCTTATCTTATTCCGGTGAAGCCAGGCATGACGAGACAATTGAGGCTCCGAGATCGATCGCCAGCACGTCAGGCGATTTTTTCCCTCTTGGAATTCGAGAACCAGTTTATGAGGTTTTGGAGGTGAAGTCTGATGGAACGGTATCAACTAGAACAATCAACAGAAGACAGCTATTGAAGTCAAGTGGTCTACGTCCACGAGATGTTCGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGCATGCTATTCTTCTAAATTTGGGTTCATTACGAGCAATAGCAATGCAAGAGCATCTGCTTATATTTAACTATAACTGTAAAGGAGGGAAAGCTTTTTTAGAGTCATTACTGCCTCGGTTAAACCCTAAGAACAACAACGGAGGACCATCCATGCCATTTGAACTTGAGGTTGTTGAAGCAGCACTGCTTTCAAGAATACAGCATTTAGAGCAGAAAATGATGGGCTTAGAACCTCGTGTGCAAGCTCTTCTTGAGGTCTTGCCAAACCGATTGACTGGCAATATATTGGAGGAACTTCGTATCAGCAAACAAACTTTGGTTGAGTTGGGTTCAAGGGCAGGAGCTCTCAGACAAATGCTGCTTGACCTTCTGGAGGACCCTCTTGAAATACAACGTATATGTATTATGGGAAGAAACTGCACACTTAAGAAAGGACACGACAATGTAGAATGCTCAGTGGCCTCAGAGAAGCAGATTGCTGAGGAGGAAGAGGAGGAAATTGAGATGCTTTTGGAAAATTACCTTCAAAGATGTGAATCTTGCCATGGCCAAGCTGAAAGGCTTCTAGATTCCGCGAAAGAAATGGAAGATTCTATATCTGTCAGTTTAAGCTCAAGGAGGCTTGAGGTTAGCAGAGTGGAACTACTTCTCCAGGTTGGAGCATTCTGTTTGGCAGTTGGTGCCCTTATAACGGGTATTTTTGGCATGAATCTGAAGTCCCATCTTGAAGAACGAGTGGGAATTAGGGTTGTTAAAGTGACCATATTTTTTTATTTGATGCAGTTTGCATTTTGGCTGACAACAGCAGGGATTATAGTCGGGGCAGTTGTAGCCTTCTTTCTCATGTATTCCTATCTCAAGGCAAGGAAAATATTTTGA 1395 0.4444 MAFTWSRLLLSRSSPSNYSIFSDLTLARSGDLVCPTFSALVHRSNISVEPPFTPLTIKLLTPRIQVQYCAKSTGEEQRTSAETALSYSGEARHDETIEAPRSIASTSGDFFPLGIREPVYEVLEVKSDGTVSTRTINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREHAILLNLGSLRAIAMQEHLLIFNYNCKGGKAFLESLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQHLEQKMMGLEPRVQALLEVLPNRLTGNILEELRISKQTLVELGSRAGALRQMLLDLLEDPLEIQRICIMGRNCTLKKGHDNVECSVASEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSISVSLSSRRLEVSRVELLLQVGAFCLAVGALITGIFGMNLKSHLEERVGIRVVKVTIFFYLMQFAFWLTTAGIIVGAVVAFFLMYSYLKARKIF 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1114 464 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 110 463 IPR039204 -
Lele11g1114 464 FunFam Magnesium transporter MRS2-11, chloroplastic 198 380 - -
Lele11g1114 464 Coils Coil 325 349 - -
Lele11g1114 464 Gene3D - 116 196 - -
Lele11g1114 464 CDD Mrs2_Mfm1p-like 122 463 IPR039204 -
Lele11g1114 464 Gene3D Magnesium transport protein CorA, transmembrane region 197 380 - -
Lele11g1114 464 FunFam Magnesium transporter MRS2-11, chloroplastic 115 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1114 Lele-ChrLele11 18401150 18406273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1114 113 464 MRS2 Gene Family AT5G22830 77.841 0.0 532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1114 09 20293586 20298444 Lele11g1114 11 18401150 18406273 hybridization
Lele10g1080 10 22175855 22180590 Lele11g1114 11 18401150 18406273 hybridization