Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1109 ATGGCGTTTTGTTCATCCACCTTCAATATCTTAAACATCCACAACTTTTCAAACGCCTGCGCTTCCACCGGGCAATATGCCTTCAAATTTCCACGTGAAATCAAAAGTTGTGGTTGTTTGAATATCACAAACTTGGATCAAAGGAGCCACATGTCCTCATCTCTTTATATTCATTCACCTGACAAAAGACGTGGTATCAGCATTCGATGTGTCGGATCAGAAGCCGTGACGAAGACCACCACTGAGTTGGATGAGGCCAAATTTGATAATGGCTGTGAACCCTTAATTGATCGGGATGGTGGGGATGGAGGTGGTTCTGGTGACGGTAGTGGAGGGACTGGTGGCGGCGGCAGCGGTAATGGGGACGATGGTAGAGATGAAGATGAGGAAGAGTTCGGTCCGTTATTGAAGTTTGTGGATGTTATGAAAGTCACAGAAGATCGGGGATTGAAGCTTCCTTCGGATATGGCGGAGGCAGCGAAGACAACAGGAGTTCGGGAAATGTTCCTTCATCGTTACTTGGAATTACAGGGTTCGGTTTGGCCACTGGGTTTTTTGATGAAGCATTGTTCTATGCTTCGAAACCGAATGCTAGCTGATCCTTCTTTTCTATTTAAAGTTGGAACAGAGATTGCTATAGATTCTTGTTGTGCAACATTTGCTGAAGTTCAGAAAAGAGGCAAGGATTTTTGGGCAGAATTTGAGTTGTATGCGGCCGATCTTCTGGTTGGTGTGGTTGTTGACATTGCTTTAGTTGGCATGTTAGCACCCTATGCTCGACTTGGGAAGCCATCAATGTCGAGAGGTTTGCTTGGACGCATTCAACATGCTTGCGCTGCTCTTCCTAGCAGTGTTTTTGAAGCTGAAAGGCCAGGCTGTAAATTCTCAGTGATTCAACGCATTGCAACATACTTTTATAAGGGTGCATTGTATGGATCAGTTGGGTTTGGATGTGGACTAGTTGGTCAAGGAATTGCAAATATGATAATGAATGCCAAAAGGAGGATTAAGAAATCTGAAGAAGACATACCTGTGCCTCCTCTTGTTCAAAGTGCTGCTCTCTGGGGTGTGTTTCTTGCTGTGTCATCCAATACTCGATATCAAATTGTGAATGGACTAGAAGGCCTTGTAGAAGCTTCTCCTGTGGCAAAGAAGTTTCCACTGGTCGCGATGATGTTCACGGTATGCGTGCGATTTGGCAACAACATATACGGCGGTATGCAGTTCGTAGACTGGGCCAAATGGAGTGGGGTGCAATGA 1260 0.4524 MAFCSSTFNILNIHNFSNACASTGQYAFKFPREIKSCGCLNITNLDQRSHMSSSLYIHSPDKRRGISIRCVGSEAVTKTTTELDEAKFDNGCEPLIDRDGGDGGGSGDGSGGTGGGGSGNGDDGRDEDEEEFGPLLKFVDVMKVTEDRGLKLPSDMAEAAKTTGVREMFLHRYLELQGSVWPLGFLMKHCSMLRNRMLADPSFLFKVGTEIAIDSCCATFAEVQKRGKDFWAEFELYAADLLVGVVVDIALVGMLAPYARLGKPSMSRGLLGRIQHACAALPSSVFEAERPGCKFSVIQRIATYFYKGALYGSVGFGCGLVGQGIANMIMNAKRRIKKSEEDIPVPPLVQSAALWGVFLAVSSNTRYQIVNGLEGLVEASPVAKKFPLVAMMFTVCVRFGNNIYGGMQFVDWAKWSGVQ 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1109 419 Pfam Protein RETICULATA-related 195 373 IPR021825 -
Lele11g1109 419 PANTHER EXPRESSED PROTEIN-RELATED 68 419 - -
Lele11g1109 419 MobiDBLite consensus disorder prediction 94 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1109 Lele-ChrLele11 18367555 18369934 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1109 11 18367555 18369934 Lele30g1095 30 14078160 14081316 CCT
Lele11g1109 11 18367555 18369934 Lele32g0298 32 1862052 1865108 CCT
Lele09g1108 09 20258469 20260839 Lele11g1109 11 18367555 18369934 hybridization
Lele10g1076 10 22116462 22121405 Lele11g1109 11 18367555 18369934 hybridization