Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1107 ATGCTATTTGGAGCTAATTCGGGTGTTAAGGTCATCATTGGCCAGTCTGGTGCTGTTAGGAGATTTGAGGGCCACTTCGAGATTTTATCATTAACTGGATCATATACAGTGGCTGCACGTCGCAGAAGTAGCATGTTCAACGTTTCTCTGGCTATACCTGATGGCAGGATCTTTGGTGGTGGGGTTGAGGGCTCATTGATAGCTGCTGGACCTAAGAACCTTTTCTGA 228 0.4649 MLFGANSGVKVIIGQSGAVRRFEGHFEILSLTGSYTVAARRRSSMFNVSLAIPDGRIFGGGVEGSLIAAGPKNLF 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1107 75 Gene3D - 1 75 - -
Lele11g1107 75 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 14 71 IPR039605 GO:0003680
Lele11g1107 75 Pfam Plants and Prokaryotes Conserved (PCC) domain 14 71 IPR005175 -
Lele11g1107 75 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 71 - -
Lele11g1107 75 CDD DUF296 15 68 IPR005175 -
Lele11g1107 75 ProSiteProfiles PPC domain profile profile. 1 75 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1107 Lele-ChrLele11 18350996 18352357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1107 16 71 AT-hook Motif Nuclear Localized (AHL) Family AT5G51590 55.000 2.54e-12 58.2