Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1093 ATGGACGACTCCGAGGCGCTCGGAAATCCCAACCCTAGTGACGGAGCAATAGCAAAGAAGCAGAAGGTGGTTGTGATAATGGGTCCCACCGGCTCTGGCAAGTCCAAGCTCGCCATTGATCTTGCTTCCCACTTCCCGGTCGAAGCTATCAACGCTGATTCCATGCAGGTTTACCGAGGCCTGGATGTTCTCACCAACAAAGTTCCACTCTCCGACCAAAAGGGGGTGCCTCACCATCTTCTGGGTACTATAAGCCCAAACGTGGAATTCACAGCTAAAGACTTTCGAGATTTTGCTATCCCTCTCATCGATGACATATCTGCTCGCAACTGCTTGCCTGTCATAGTTGGGGGTACTAATTATTTCATCCAGGCCCTCGTGAGTCCATTCCTTCTAGATGAGTCAGTTGAAGATATGGATGAAACCTGTACGGACAATCTTTCTGGTACTACACCATTGGATAAGAGTTTCATCCCTGAAAAGGACCGTAATTATAATTTGCTTAAAGATATTGATCCAGTTGCAGCAAATAGAATGCATCCAAATAACCATAGAAAGATTAGTCAATACCTTAATTTGTATGCTCGCACCGGAGTTCTTCCAAGCAAAATTTTCCAGGGAAAAGCCGCGGAGAAGTGGGGTCAAGTTGGTAACTCGAGATATAATTGCTGTTTTATATGTGTGGATGCATCTCTCCCTGTACTGGACAGATATGTAGAACAGAGGGTAGATTCCATGATGGATGCTGGATTAGTTAATGAAGTCTATGACATTTACAACCCAAATGCTGTTTATAGTCAAGGCTTTCGGCAGGCAATTGGTGTCCGTGAATTTGAACCTCTTCTGAAAACCCTTGTAATCGAAGAAATCTACAAAAGAGAGAAAGAATTGGCTGAGGAATCCAGGAGAGAAAAGGGTGATAAATTGTCCAATGACGATCTGAGGGAGCTCTTGAAGTTGTCTTCTGACACGAAATCCATCACGCTTATGGAAGAAGCTATTGAAAAAGTAAAGGTTAACACACGGAGACTAGTCCGCCGTCAGAAGAGGATGCTTAATCGACTGCAGAAACTGTTTGATTGGACTATACACTATGTGGATTCCACAGAATCATTATCAAGTAAATCAGACGATATATGGACTGCTCAAGTGGTAGAACCTGCGGCGAAGATCGTTAGATCTTTCCTTGGTAATAACGAGAGCTTGCCATCCACGTCTGAAACAGCAAATAGCAGTGGGATGAAGATACTTCAAAGGGACCTATGGACTCAATACAGATGCAAGGCCTGTGGAGATAGGGTGCTTAGAGGAATACATGAATGGGAACAACACAAACAGGGTCGTGGACACCGCAAACGTATTTCTAGTCTCAAGAACAAATCACAAGGTCTCTGTTCGGTGGATCAATAG 1410 0.4418 MDDSEALGNPNPSDGAIAKKQKVVVIMGPTGSGKSKLAIDLASHFPVEAINADSMQVYRGLDVLTNKVPLSDQKGVPHHLLGTISPNVEFTAKDFRDFAIPLIDDISARNCLPVIVGGTNYFIQALVSPFLLDESVEDMDETCTDNLSGTTPLDKSFIPEKDRNYNLLKDIDPVAANRMHPNNHRKISQYLNLYARTGVLPSKIFQGKAAEKWGQVGNSRYNCCFICVDASLPVLDRYVEQRVDSMMDAGLVNEVYDIYNPNAVYSQGFRQAIGVREFEPLLKTLVIEEIYKREKELAEESRREKGDKLSNDDLRELLKLSSDTKSITLMEEAIEKVKVNTRRLVRRQKRMLNRLQKLFDWTIHYVDSTESLSSKSDDIWTAQVVEPAAKIVRSFLGNNESLPSTSETANSSGMKILQRDLWTQYRCKACGDRVLRGIHEWEQHKQGRGHRKRISSLKNKSQGLCSVDQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1093 469 Pfam IPP transferase 56 350 - -
Lele11g1093 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 258 IPR027417 -
Lele11g1093 469 MobiDBLite consensus disorder prediction 447 469 - -
Lele11g1093 469 TIGRFAM miaA: tRNA dimethylallyltransferase 23 290 IPR018022 GO:0008033
Lele11g1093 469 Hamap tRNA dimethylallyltransferase [miaA]. 23 373 IPR018022 GO:0008033
Lele11g1093 469 FunFam tRNA dimethylallyltransferase 420 463 - -
Lele11g1093 469 Gene3D - 20 420 IPR027417 -
Lele11g1093 469 Gene3D Classic Zinc Finger 421 463 - -
Lele11g1093 469 Gene3D - 159 208 - -
Lele11g1093 469 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 396 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1093 Lele-ChrLele11 18205807 18208987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1093 11 459 C2H2 Transcription Factor Family AT2G27760 55.315 2.14e-179 508