Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1088 ATGGTTAACTATTTACCAAACCAGGTTGCTCTTATACATATACCCCTGTCCCCAGATTCTCGTCCACCCTCCAACGAAGAAAGAGCAGCTGCGCAATCCCCCCGTCTCTTGAAGCAAGCAGAGATGAAGGTGATCGCTGCGTATTTGCTGGCTGTATTGGGAGGGAACGCGGCCCCTGCCGCCGACGATCTGAAGAACATCCTTGGCTCAGTTGGAGCTGAGATTGATGATGAAAGGATTGAGTTGCTTTTGTCTGAAGTCACTGGTAAAGACATCACTGAGCTAATTGCTAGCGGAAGAGAGAAGTTGGCTTCAGTACCCGGTGGTGGTGGTGCAGTTGCTGTTGCTGCTGCACCTGCAGCTGGTGCGGCTGCCGGTGGTGTTGCACCTGCTGCAGAGGCTAAGGAAGAAAAGAAGGTGGAAGAGAAGGAAGAATCCGATGATGACATGGGTTTTAGTTTATTCGACTGA 471 0.5096 MVNYLPNQVALIHIPLSPDSRPPSNEERAAAQSPRLLKQAEMKVIAAYLLAVLGGNAAPAADDLKNILGSVGAEIDDERIELLLSEVTGKDITELIASGREKLASVPGGGGAVAVAAAPAAGAAAGGVAPAAEAKEEKKVEEKEESDDDMGFSLFD 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1088 156 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 42 156 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele11g1088 156 Hamap 50S ribosomal protein L12 [rpl12]. 43 156 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lele11g1088 156 Gene3D - 41 100 IPR038716 -
Lele11g1088 156 FunFam 60S acidic ribosomal protein P2 39 100 - -
Lele11g1088 156 Pfam 60s Acidic ribosomal protein 59 155 - -
Lele11g1088 156 CDD Ribosomal_P2 42 156 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele11g1088 156 MobiDBLite consensus disorder prediction 132 146 - -
Lele11g1088 156 MobiDBLite consensus disorder prediction 126 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1088 Lele-ChrLele11 18169733 18172205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1088 42 156 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 69.565 8.87e-34 113