LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele11g1087	ATGGAGATGGAAGTTGAAGCATATCTGAGACGGCGTTATGAAAGTCAGATTGCGGATATTGAATCAAAGAGAAGGAAGACCTTGATCTTAAATCAGGCAAAATCTGATGCAGCAGAAGCTTATGAATCCATATTAACTGGAAGAAGAAATTCGATGTGGACAATGTGTGTTGGGGATGACATAGAGGATTTGGAGTACACTCTAAAACCAGAGTTTGAAGGATGTTTTAAGGTGACAAATGTTCAAAATGAGATTGAGCTTCTTAGATTGTGGTTTTCTCATCTGCAAGAGGTGAAACCTGGTATATATTCTACAACATATAACGAAAGAAAACCTTGGCTTCCGAATGCTGTTACAAAAGCAAAGTTGGGCTATGATCCCCTAGAGGTGAACCCAGAGGACATGGTTTGCTTTGCAAAGGAAAAACCTCAGTCTGATCCTGAGAAATTTTACAATAATCACTGTCTTGAGAGTGAGACATACATTGGTGGCCATGTGGAATGCCTTGAAAGTGGTGTTTTTAGATCTGATCTTCCAACTAGTTTTACCCTTGAACCTTCAGCATATGAGCAATTGATCAACAACCTTGACCGAGACCTGCACTATGCTATAAGCGTAGAGGGTAAGATGGGCTTGGATTCCATCTCTAATTATGAAGTTAAGAATGCTATCATGGAAAAGCCACCTTCAATAGTTACAGATGAGGTCTGCACCGCATGTGATTTCGACCGTCCTGGCAAGACTTGCCTTCGAAACCTTGAGTGGGTTTGGCGTGGAGAAATTTTCATGGCAATGAAAAGATTGAGTCAGTTTGTTGAAAGTGCTGATAGGCAGTCATCTAAATCATTTCTTGACATGCCCAAATCAGAGCAGCAATCCAGGCTACAAGAACGTCTAAAGAAATACTGCCACAAGGTTATGAATCTTTTGTTCAACTTGGGGGCAAGATGGTACTCCATGGAAATGGCCGGAGTTGTTACATATACTGGTGCAAAAATCATTCAGAATGCTCGATTGCTTGTTGAGAAAATAGGAAAGCCACTTGAATTAGACCCGGATGAGACTCAGAGGAAATTGACTATTTCATACCCTTGTGTCATGCTTAACGTTGATGTGGCAAGGAATAATACAAATGAGCAGTACCAGTTACTTGGCTTATATATGGAGGGTATTCTTTCTAATTCTGAATTTTTTGACAGACACTCATTGATCCAGTTGGGAAAACTTATACAATTCACTGCGAATGCTCTATTGAATTTGAAGTTGATGGACCATACAAGGAAGAGCATTTTTGACAAGTTTCTCCACGGGTCAACCATAGAGCAATGTTATTCAGCTGTCGCTACCGTGGCAAACCGCTGGCTTGATCTTCTTGATTCTTTAGCTGAATATGGTGAGCAGAAGTCCTGTGCTGTTACCACTGCTGGACGGCTTGCTGACTTTCTTGATATTATTGCTATTTCACCCGTCTCTTCTTTGGGAATGTGCTGTATTTTCAATTCTCGATATAATTGGTTAACATATGAAACAAAAGTTCCACTGCAGTTTAATGCCATAGTCCAGCTTGGTTGTGTATGCAAGGTGGACAAAACTGATAAAAAACGTAGTCTTCAGGAACCTTGGAATCTGAGTGAATTGCACATGAAGACCACTGCAGAATGCTCTTATCTTGAACAATCCATATCCTTCTTTTACTTCTCTCATAGCATCTCCGAGGGGCGGACTATATATGTTGGATATTTTCCTGTATCAAAAGCAGCATCTGTTGTGGTAGTAAATCCGTATCAAAACAAGGACTTATCTCCGGTATTTCGTGAAAGACAATTCCGTGATGCTGGTGAAGCTTTGTCTATTGAGACACCTCCCAAAAATGGTGTTAGATTTAAGGTGGACTATGTTTTGCATGTCAAGGATTCTGAAACGATGGTGCAAAAAGTGATAAATGATCAAAGGTTTCATTTCACCTTGATCTCAGTTTACAATTGTTCTTTTTCAGAAGGAAGATAG	2007	0.4011	MEMEVEAYLRRRYESQIADIESKRRKTLILNQAKSDAAEAYESILTGRRNSMWTMCVGDDIEDLEYTLKPEFEGCFKVTNVQNEIELLRLWFSHLQEVKPGIYSTTYNERKPWLPNAVTKAKLGYDPLEVNPEDMVCFAKEKPQSDPEKFYNNHCLESETYIGGHVECLESGVFRSDLPTSFTLEPSAYEQLINNLDRDLHYAISVEGKMGLDSISNYEVKNAIMEKPPSIVTDEVCTACDFDRPGKTCLRNLEWVWRGEIFMAMKRLSQFVESADRQSSKSFLDMPKSEQQSRLQERLKKYCHKVMNLLFNLGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDPDETQRKLTISYPCVMLNVDVARNNTNEQYQLLGLYMEGILSNSEFFDRHSLIQLGKLIQFTANALLNLKLMDHTRKSIFDKFLHGSTIEQCYSAVATVANRWLDLLDSLAEYGEQKSCAVTTAGRLADFLDIIAISPVSSLGMCCIFNSRYNWLTYETKVPLQFNAIVQLGCVCKVDKTDKKRSLQEPWNLSELHMKTTAECSYLEQSISFFYFSHSISEGRTIYVGYFPVSKAASVVVVNPYQNKDLSPVFRERQFRDAGEALSIETPPKNGVRFKVDYVLHVKDSETMVQKVINDQRFHFTLISVYNCSFSEGR	668

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele11g1087	668	Pfam	DNA polymerase family B, exonuclease domain	53	108	IPR006133	-
	Lele11g1087	668	Gene3D	Palm domain of DNA polymerase	247	394	IPR023211	-
	Lele11g1087	668	PANTHER	DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A	508	651	IPR029703	GO:0003677\|GO:0003887\|GO:0006260\|GO:0006281\|GO:0008622
	Lele11g1087	668	SUPERFAMILY	DNA/RNA polymerases	132	484	IPR043502	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele11g1087	Lele-ChrLele11	18158050	18169484	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele11g1087	508	651	Core DNA Replication Machinery Family	AT1G08260	49.306	2.92e-37	148