Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1071 ATGATCAAAATAAACCTCGTCAGTCACACATTCTCCGTCGCTAAACTCAGGTCCGTTTGCTTTCACACCGGTGAACTCGACTATGCCTTGTCCATTCATCTTCGAATTCAGAACCCCACTTCATACCTCTTCTTTCGCCCTCTCATCAAGGGCTTTTCTGAAAGTTCAAATCCTTTTCAGGCTGTAATTCTTTATGCCCACATGCTATTCTGCTTAGAAGATTTGCGGGAAATAGATTTCTCTGTTCCCTCTGTACTCAGAGCTTGTGGCAGATCCTCTGCGTTCAGAGAAGGGAACCAAATTTTCGGTCATATATTGAAGAGCCATCTATGGTTTGACCCGTTTGTGACAAATTCTGTGGTTCTTATGTGGTTGGAACTCTGTGAGATCGAACTTGCAAGATCTGTGTTTGATAGAATGCCTGTGAGAGACTTGATTTCTTGGAATTCCTTCATTACGGATCTGGGTTTTGCTGAGGAAGGGAAATGGATACATACTTACATATCTACCAATAAGATAGATAGTTGTTCTAGTTTTATTGGATCATCTCTAATAAACATGTATTCAAAATGCGGCCAAATCGAAAATGCCTACCATGTGAAATACAAGATCATTCCTAAGATTCAGCACTATGGAGGCATCGTTGACCTTCTCGGAAGATCAGGTCATTTAGAAGAAGCACTCGAGATCATATATGATATGCCTGTGGAGCCTGATGTTTTAATCTGGAAGGCCATTCTGAGTGCCAGCATGAAGCATAATAACATCGAAATCGGTCAGATTGCTGCATCGCGAGCTATGGATTTGGCTCCAAAGGATTCAAGTTGTTATGTTCTCCTCTCAAATCTGAGTGTCAAATTGGGATTGTGGGATGACGTGGCTAGAGTTAGAACAATGATGAAAAAGAGAGGAGTAAGAAAAATTCCTGGGTGCAGCTCCATTTTTGTGGATGGTAAAGTTCATGAATTCCTAATTGGGAAAGCTATAGATGTGGAGAGCAACCAAAGCATTCCCTCCATGATAGAGGAAGTGGTCTCAAAGTTGAAATTGGAAGGGTATGAGCCTGACCTAAATGAAGTTCCTCTGGATCTTGAAGACGATGAAAAGGGATCCCATTTAGCTCTTCACAGTAAGAAGATGGCTCTTGCTTTTGGACTGCTGAATACCTCCCATGGGATCCCCATTCATATAGTGAAGAACTTGAGGATATGCTGTGACCGTCACTCGTTCATGAAGCTGGTTTCCGAAGTATACAACCGCAGAATTATTGTCAGAGACAAAAACCGTTTTCATCATTTTGGAAATGGTTATTGTTCTTGCAAAGATCATTGATTCTCTCGCCCTTCAATTTCAGTTTCCGAGACAGAAACGGTCGCATCCGACAAGAGCCATATCCAACCGTTGGCATATTCATCTCTATCCCTGCCTCTTCCACAATTGCATCATGAATCGCCGTTAAAAGAGACCTCAATTTCTTCACCGAACAGTAGTCATCAAAATTCAATACTCTCTCTTACCCTTGAAGAAATCCAAATCAAGAGCGGAAGGATGTTTGGATCAATGAGCATGGACGAATTCCTAGCCAACATTTGGAATTCCGACGATAACCCGGTCGATTCGCAACCGCCGTTGTCGCCCTCCCGTGACGAATTGCTTGTTCAGAACAAAAATGGAGGTGCAGAAACAGAACCAGTTGTCTCCCAACAGGCCTCATTGTCTGTTCCTCCACCGATTTGCAAGAAAACTGTGGATGAGGTTTGGTCTGAGATCCGAAAAGATCACCGGCCGCAGCAAAATGAAGAAGCTAATGACGAAATTAGCGGCAGTGAGAACCTCAAAAGGCAACAAACACTTGGGGAAATGACTCTGGAGGATTTCCTGATAAAAGCTGGAGTAGTTCAAGAATCATCTTTACCGTCAATTATTCCCTTGAAGTCTACTGGACCTCAACAACAACCACCACCACCATCTTCATCGTTGCCATTTCAGGTCCAAACTGAGAATATGACAGATAATAACAGACAATTCGATGCGTCTTACAAAATGGGGCCTGCAATAAGGATGGGAGTTTTTACCCAACAAAATGTCGTCGGAGGCCGTTCGTCATCATCAGGAAATGGAACTGCAACTGCAACTGCAACATACCGAGTGTTGTCGCAGAGTCATAGCTTAGCCGGAAAAGAGGCCGCTACTGAGAAATGTCAGGCATCAGGAGGAACTAGGAATAGCAACAAGAAGAGGATAATTGATGGCCCTCCTGAAGTGGTGGTGGAGAGAAGGCAGCGTAGGATGTTGAAGAATCGAGAATCAGCAGCACGTTCTCGAGCAAGAAGACAGGCATATACAGTGGAGTTAGAAGCAGGTCTGAATCAACTTAGACAAGAAAATGAAAAGCTGAAAGAAATTCTGGCTGAAGCTGAGCGGAAAAGAAAACAAGAGATAGCGAGGAAGAAGCATGCAACCATGGCAAAGAAAAGAACAGAGAAGTTTAGGGATCTAAGGAGGACAGTGAGCGCAGCCTGGTGA 2526 0.4351 MIKINLVSHTFSVAKLRSVCFHTGELDYALSIHLRIQNPTSYLFFRPLIKGFSESSNPFQAVILYAHMLFCLEDLREIDFSVPSVLRACGRSSAFREGNQIFGHILKSHLWFDPFVTNSVVLMWLELCEIELARSVFDRMPVRDLISWNSFITDLGFAEEGKWIHTYISTNKIDSCSSFIGSSLINMYSKCGQIENAYHVKYKIIPKIQHYGGIVDLLGRSGHLEEALEIIYDMPVEPDVLIWKAILSASMKHNNIEIGQIAASRAMDLAPKDSSCYVLLSNLSVKLGLWDDVARVRTMMKKRGVRKIPGCSSIFVDGKVHEFLIGKAIDVESNQSIPSMIEEVVSKLKLEGYEPDLNEVPLDLEDDEKGSHLALHSKKMALAFGLLNTSHGIPIHIVKNLRICCDRHSFMKLVSEVYNRRIIVRDKNRFHHFGNGYCSCKDHXFSRPSISVSETETVASDKSHIQPLAYSSLSLPLPQLHHESPLKETSISSPNSSHQNSILSLTLEEIQIKSGRMFGSMSMDEFLANIWNSDDNPVDSQPPLSPSRDELLVQNKNGGAETEPVVSQQASLSVPPPICKKTVDEVWSEIRKDHRPQQNEEANDEISGSENLKRQQTLGEMTLEDFLIKAGVVQESSLPSIIPLKSTGPQQQPPPPSSSLPFQVQTENMTDNNRQFDASYKMGPAIRMGVFTQQNVVGGRSSSSGNGTATATATYRVLSQSHSLAGKEAATEKCQASGGTRNSNKKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAGLNQLRQENEKLKEILAEAERKRKQEIARKKHATMAKKRTEKFRDLRRTVSAAW 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1071 841 Pfam PPR repeat 211 235 IPR002885 -
Lele11g1071 841 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2 153 - -
Lele11g1071 841 MobiDBLite consensus disorder prediction 591 617 - -
Lele11g1071 841 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 762 777 IPR004827 GO:0003700|GO:0006355
Lele11g1071 841 Coils Coil 782 816 - -
Lele11g1071 841 Pfam E motif 253 314 IPR046848 -
Lele11g1071 841 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 757 809 IPR004827 GO:0003700|GO:0006355
Lele11g1071 841 MobiDBLite consensus disorder prediction 532 552 - -
Lele11g1071 841 Gene3D Tetratricopeptide repeat domain 72 167 IPR011990 GO:0005515
Lele11g1071 841 Gene3D Tetratricopeptide repeat domain 170 267 IPR011990 GO:0005515
Lele11g1071 841 MobiDBLite consensus disorder prediction 641 664 - -
Lele11g1071 841 SMART brlzneu 755 819 IPR004827 GO:0003700|GO:0006355
Lele11g1071 841 Pfam bZIP transcription factor 759 810 IPR004827 GO:0003700|GO:0006355
Lele11g1071 841 MobiDBLite consensus disorder prediction 602 617 - -
Lele11g1071 841 SUPERFAMILY Leucine zipper domain 759 807 IPR046347 GO:0003700|GO:0006355
Lele11g1071 841 FunFam pentatricopeptide repeat-containing protein At2g33680 198 335 - -
Lele11g1071 841 MobiDBLite consensus disorder prediction 532 563 - -
Lele11g1071 841 Gene3D - 757 812 - -
Lele11g1071 841 Pfam DYW family of nucleic acid deaminases 352 443 IPR032867 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1071 Lele-ChrLele11 17964910 17970883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1071 499 841 bZIP Transcription Factor Family AT3G44460 45.480 1.18e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele11g1071 DYW_deaminase 1.8e-26 CL0109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1068 09 19889449 19895931 Lele11g1071 11 17964910 17970883 hybridization