Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1064 ATGACCGAGGTCCTCCATTTCTCATCCCATTTCTCTTGCTCGTCAACGATAACCTCTCCCTCTTCGTCTTGCGCAACCCCTCCCAGCAATGGCATTTTCATTATTTGTGACCAAGAACCTCCATCCCCGTCTTCGCTAGCCGTGGCCGGTTGTTCGCCGGCGACGGACTGTGACGCCGAGGAGCTGGAGGAGAGGGACAAGCGCCGGACGGAACAGCTTTCTGTTTTGGCGCTTGTTGTGGCCATTTTCAGGAAATCCTTGCTGGCTTGTAAGAGTGGTAGGAGGGAGCTTTGCGCGATGGAGATCGGATGGCCTTCCAATGTGCGGCATGTTGCACATGTCACATTTGATAGATTCAATGGTTTCTTGGGTTTGCCTGACGAGTTCGAACCTGAAGTGCCCAGAAGGCCCCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCGACGGAATCCATGCAGTTATCATATGACTCAAGAGGGAACATTGTGCCTACAATTTTGTTACGAATGCAGAAACGCTTGTATTCTCAAGGAGGGTTGCAGGCAGAAGGGATTTTCAGAATCAATGGAGAAAATAGTCAAGAGGAATATGTTAGGGACCAATTAAATAGTGGAGTGGTCCCACAGGGCATTGATGTACATTGTCTGGCGGGGCTTATCAAGGAACTAGTGAGGCATCTACCTCCTACTGAAGCTGCCCTCTTGGACTGGGCCATCAATCTGATGGCTGATGTTGTACTACAGGAACATCTGAACAAGATGAACGCACGCAACATTGCCATGGTTTTTGCGCCAAACATGACTCAGATGGCAGATCCTTTAACTGCGTTAATGTACGCAGTCCAAGTGATGAATTTCTTAAAGACACTTGTACTAAAGACCCTCCGAGAAAGAAAGAATTTGTTGGTAGACTCTCCTCAATTTCATTTCGAGCCTTCGGATGAGAATGGACACCATAGCCCTTTGCAATCCTGCCAGAGAGATGTTGATGAAGAAAGTGAAGATGCTCAGGAAAACTACATTTCTGAGAAAACTATCCAAGAATGTTCCCCTAACTCAACTCACCAAAGCATTAACCTAACTGGAGAAGAATCTAGCAGTTTGTTAACCTCTTCTGACCATCTAGTTTGTGGTGGAGGTTTATATTCTAAGTTTTCGCCCAGAGGAAATGATGGGAAGAGTAAAACTGACCAACCAAGTAATCCAAATCCTAGAAGGAAGAACAAAAAAGCCAGGGTACAACAACCTACAATACATGGAAAAGTGCTTGTTGAGAAGAGGGGGATTAGCAGTCTGAGTAGGTTGGATTCAAGATCAGAGAGGATAGAAGCCTGGAGGTGA 1341 0.4638 MTEVLHFSSHFSCSSTITSPSSSCATPPSNGIFIICDQEPPSPSSLAVAGCSPATDCDAEELEERDKRRTEQLSVLALVVAIFRKSLLACKSGRRELCAMEIGWPSNVRHVAHVTFDRFNGFLGLPDEFEPEVPRRPPSASATVFGVSTESMQLSYDSRGNIVPTILLRMQKRLYSQGGLQAEGIFRINGENSQEEYVRDQLNSGVVPQGIDVHCLAGLIKELVRHLPPTEAALLDWAINLMADVVLQEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVLKTLRERKNLLVDSPQFHFEPSDENGHHSPLQSCQRDVDEESEDAQENYISEKTIQECSPNSTHQSINLTGEESSSLLTSSDHLVCGGGLYSKFSPRGNDGKSKTDQPSNPNPRRKNKKARVQQPTIHGKVLVEKRGISSLSRLDSRSERIEAWR 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1064 446 PANTHER MKIAA1688 PROTEIN 1 221 IPR044785 GO:0005096
Lele11g1064 446 SMART RhoGAP_3 161 295 IPR000198 GO:0007165
Lele11g1064 446 CDD CRIB 100 140 - -
Lele11g1064 446 Gene3D Rho GTPase activation protein 225 300 IPR008936 -
Lele11g1064 446 CDD RhoGAP 164 290 - -
Lele11g1064 446 MobiDBLite consensus disorder prediction 381 446 - -
Lele11g1064 446 Gene3D CRIB domain 98 131 IPR036936 -
Lele11g1064 446 MobiDBLite consensus disorder prediction 307 338 - -
Lele11g1064 446 Pfam RhoGAP domain 220 269 IPR000198 GO:0007165
Lele11g1064 446 Gene3D Rho GTPase activation protein 134 224 IPR008936 -
Lele11g1064 446 Pfam P21-Rho-binding domain 101 128 IPR000095 -
Lele11g1064 446 ProSiteProfiles Rho GTPase-activating proteins domain profile. 147 353 IPR000198 GO:0007165
Lele11g1064 446 ProSiteProfiles CRIB domain profile. 102 115 IPR000095 -
Lele11g1064 446 SUPERFAMILY GTPase activation domain, GAP 142 291 IPR008936 -
Lele11g1064 446 MobiDBLite consensus disorder prediction 431 446 - -
Lele11g1064 446 SMART PBD_5 102 136 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1064 Lele-ChrLele11 17898151 17901006 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1062 09 19835665 19838550 Lele11g1064 11 17898151 17901006 hybridization