Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1057 ATGGAAGATCTTCCTCCTGGTTTTCGCTTCTACCCTACAGAGGAAGAACTCGTGGCTTTCTACCTCCATAACAAACTTCAAGGTGGACGACGCAGTGACCACATAAACAGAGTCATCCCTGACATTAGCATTTATGATTTTGAGCCCTCCCAGCTTCCCAAGCTTGCGGGAGAGATGTGTCGTGGAGATACAGAGCAATGGTTCTACTTCTCGCCGAGACAAGAGAGAGAAGCCAGAGGAGGCAGACCAAACAGAACCACCGCTTCTGGGTATTGGAAAGCCACTGGTTCTCCGGGCTACATTTACTCTTCTGATAACAGAGTCATAGGGTTGAAGAAAACCATGGTTTATTACAAAGGCAAAGCTCCTTCCGGAAGGAAAACCAAGTGGAAGATGAACGAATACAAAGCCATCGAATTCTCTCCCCAATCCTACTCCGTCGCCACTCCTAAGTTGAGGCATGAAGTCAGCTTGTGCCGGGTTTACGTGACATCCGGAAGCTTTCGAACATTTGATCGCCGTCCTTTAGCTTCTTCTTCAACAAGTGGGCACGATGAGAATTTAAGGGTGGATGAATCAAAGTCACAACAGTCCCAGATGGTCGAGGATCAAGTCGTGCGACCCAGAGTGTAA 633 0.4803 MEDLPPGFRFYPTEEELVAFYLHNKLQGGRRSDHINRVIPDISIYDFEPSQLPKLAGEMCRGDTEQWFYFSPRQEREARGGRPNRTTASGYWKATGSPGYIYSSDNRVIGLKKTMVYYKGKAPSGRKTKWKMNEYKAIEFSPQSYSVATPKLRHEVSLCRVYVTSGSFRTFDRRPLASSSTSGHDENLRVDESKSQQSQMVEDQVVRPRV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1057 210 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 189 - -
Lele11g1057 210 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
Lele11g1057 210 Pfam No apical meristem (NAM) protein 5 136 IPR003441 GO:0003677|GO:0006355
Lele11g1057 210 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Lele11g1057 210 MobiDBLite consensus disorder prediction 173 210 - -
Lele11g1057 210 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1057 Lele-ChrLele11 17852749 17853574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1057 2 193 NAC Transcription Factor Family AT5G22380 58.500 5.74e-84 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele11g1057 NAM 3.2e-30 No_clan