Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1056 ATGGAAGCAGCGACAGCAATCTGGGATGCATCGAAGTGCTTATGTGGCAGAACTGCCAAACATGCTGCTTTCATTTGCCGTTTGGAGGACAACCTGGGATCATTGAGGAGCCAATGGGCAGAGCTACGAAGCCTAAGCCAAGATGTCAATTCAAGAATCCAACAAGCTGAGAGTTTGGTTCATATGCGAAGAACCAGAGAAGTCGATGGTTGGCTGAAAAGTGTAAACGCTTTAGAACAGGAAATGGATGACGTTACGCAACAAGCTGCTAACGTTATCCAGTTCAAGTGTTTGGGTAACCTATGTCCAAAGAATTGTTTCTCCAGCTACATCATAGGAAAAGAGGTTGTTAAAACACTAGATCGTGTCGGAGAATTGATGGCTAGAGGCCAAAAATTTGGTAATGATGCTAATATTGCTTATCAGCTGCCATGTGAGCCTGTGAATGAGATGCCAGTCGCCAACACTGTTGGCATGGATTCAATGTTAAAGAAGGTATGGGATAGCATTGAAGACAAAAATGTAGGTGTTATTGGTTTATATGGGATGGGTGGTTCTGGAAAAACAACCCTTATGAGGAAACTCAATAATGAGTTAGTGAAAAGAAGTCATGATTTTGTGCTGGTAATATGGGTAGTTGTTTCTAAGGATCATACTATTGATCAAATTATGGAAGACATTCGACAAAAATGTGGGATCGGTGAAACGAAATGGAAGAACAAAAGTAAAGATGAGAAAGCCGTAGAAATATTTAGGGTCATGAAGCAGAAAAAGTTCATTCTGCTGTTAGATGATGTATGGGAGGAACCAGATTTACAAAGTGTTGGAGTTCCACTACCAAATGAGGCCAATCAATCAAAAATTTTGTTCACAACACGTCTTGAAAATGTATGTAATCAAATGCAAGCGAAGAAGTTCAAAGTGGAATGTTTAACAGAGAAAGAAGCATTGGAATTGTTTTGCATGAAAGTGGGTGCAGAAACTCTAAATTCTCACCCAAGTATCAATGGGCTAGCACGAGAGCTTGTGCAAGAATGCAAAGGATTACCACTCGCACTGATAACCGTAGGACGAGCTATGGCCGGCCGGAAAAGTCCACAGGCTTGGAAACGTGCTATAAGGGAGCTACAAAGTTTCCCTTCAGGGGTCACCGGTATGGAGAAAGAAGTATTCAACACTCTCAAGTTCAGCTATGATAGCCTTCCTACTGACATTGACAGAAAGTGTTTCTTATATTGTGCATTATTCTCGGAGGATCGAACGGTTTATGTCCCTCGTCTGATTCGCTTTTGGATCGGCGAAGGATTTCTCGAGGAGCATGTTAGTAGTATCCATGATGCCTATAATCATGGGGAAGATATAGTGGAAAGGTTAAAGCTAGCATGTTTATTGGAAGGTGAAGAATTCCTTTGGGTCAAGATGCATGATGTGGTTCGAGACATGGCACTGTGGTTGGCTCGTAACCAAGATCAAGAGAAAAACAAAGTTCTAGTGCAAGGTGAATCACTAGGATCATCACAAATTGATAATACTGAAAGATCAATGATGATAGAAAGGATTTCAATAATGTATGCAAAAGGAGACCACCGGCATGTTCCAATTTGTCCAAATCTTTTGACCCTAATTGTGTGGGGCAATGACTGCAAAATAGATTTCGCAAATGTCCAATTCTTACGCAACTTGAAAGTTTTAAGTCTAAGGATGGAGAGGATTTCGGCAATCCCGGCTGAGATAGGTCAACTAACTCATTTGGAATATCTGGAATTATCCGAAATGCACATCAAAGAAAAATTACCACTTCAGATGAAAAATTTGAAGAACTTGAGAATATTCCTCCTAGAGTATGTTCATTTCAGTCTTGAAATCATTCCTTTGGATGTAATATCAAACCTCAAGGGATTAAGAGTGTTCTCATTTATCGAAAGCATATTCAAAGAATGGAAATCCTCATTGCAAAAGATAAAGTCCTGGTTTCTTGACGCCATGCACTTAGCCCATACGATGGAGAAATCATTTTTGGAGCAGCTAGAGTTACTACCATTTTTGGAGGATCTAAGCATCACCTTGGAGACTGCCACAGGTATCAAGAAATTGCTCAGCTCGACCAAATTGAAACCTTGTGTGAGATTAATCGGACTTTATCAATACAAGATGGCGGCTGCAAACACCACAACATTATTGTTACCATCTATGAAAAGTATGCAACATCTTGAGCGCATGACTTTAGTTGGATTACAAGACAATATGACAGAGTCCTCTGTTAATCATGCATACCCTTTTTGCCAGCTTCGTTGGGTAACAATTTTGGATTGTCATAACATGACTCATTTGACATGGCTCAAGTATGCCGTAGTCCTCGATTATCTTATCGTAGAAAACTGTAACACAATGGAAGAAGTGATAAAAGAGGCTGAAGAAGTGAGAAATATGGATGAGCTATTCTCAAATCTTAGGTACATAAGCTTGAGAAATTTGCCTATGCTCAAGAGTATATACAAGAAAGCCCTGCCTTTTCCTATGTTGCAATACATGAATATAATGGAATGCCCTAATTTGAAGAAGCTCCCTTTAGATTCCAACTCTGCAAGAAATAAGTTAAGGGCAATTTGGGGAGAAAAACTATGGTGGGACAATTTAGAGTGGGATGACCAAACCATTAAGGGACAATTCTGTTCAAAATTTAAAGACTAG 2691 0.3987 MEAATAIWDASKCLCGRTAKHAAFICRLEDNLGSLRSQWAELRSLSQDVNSRIQQAESLVHMRRTREVDGWLKSVNALEQEMDDVTQQAANVIQFKCLGNLCPKNCFSSYIIGKEVVKTLDRVGELMARGQKFGNDANIAYQLPCEPVNEMPVANTVGMDSMLKKVWDSIEDKNVGVIGLYGMGGSGKTTLMRKLNNELVKRSHDFVLVIWVVVSKDHTIDQIMEDIRQKCGIGETKWKNKSKDEKAVEIFRVMKQKKFILLLDDVWEEPDLQSVGVPLPNEANQSKILFTTRLENVCNQMQAKKFKVECLTEKEALELFCMKVGAETLNSHPSINGLARELVQECKGLPLALITVGRAMAGRKSPQAWKRAIRELQSFPSGVTGMEKEVFNTLKFSYDSLPTDIDRKCFLYCALFSEDRTVYVPRLIRFWIGEGFLEEHVSSIHDAYNHGEDIVERLKLACLLEGEEFLWVKMHDVVRDMALWLARNQDQEKNKVLVQGESLGSSQIDNTERSMMIERISIMYAKGDHRHVPICPNLLTLIVWGNDCKIDFANVQFLRNLKVLSLRMERISAIPAEIGQLTHLEYLELSEMHIKEKLPLQMKNLKNLRIFLLEYVHFSLEIIPLDVISNLKGLRVFSFIESIFKEWKSSLQKIKSWFLDAMHLAHTMEKSFLEQLELLPFLEDLSITLETATGIKKLLSSTKLKPCVRLIGLYQYKMAAANTTTLLLPSMKSMQHLERMTLVGLQDNMTESSVNHAYPFCQLRWVTILDCHNMTHLTWLKYAVVLDYLIVENCNTMEEVIKEAEEVRNMDELFSNLRYISLRNLPMLKSIYKKALPFPMLQYMNIMECPNLKKLPLDSNSARNKLRAIWGEKLWWDNLEWDDQTIKGQFCSKFKD 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1056 896 Gene3D Ribonuclease Inhibitor 517 880 IPR032675 -
Lele11g1056 896 CDD AAA 157 266 - -
Lele11g1056 896 SUPERFAMILY L domain-like 473 860 - -
Lele11g1056 896 Gene3D - 311 402 IPR042197 -
Lele11g1056 896 FunFam Probable disease resistance protein At5g66910 310 397 - -
Lele11g1056 896 FunFam Probable disease resistance protein At1g61300 140 306 - -
Lele11g1056 896 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 413 IPR027417 -
Lele11g1056 896 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 33 856 - -
Lele11g1056 896 Coils Coil 68 88 - -
Lele11g1056 896 Gene3D - 147 310 IPR027417 -
Lele11g1056 896 PRINTS Disease resistance protein signature 346 360 - -
Lele11g1056 896 PRINTS Disease resistance protein signature 177 192 - -
Lele11g1056 896 PRINTS Disease resistance protein signature 579 595 - -
Lele11g1056 896 PRINTS Disease resistance protein signature 253 267 - -
Lele11g1056 896 FunFam Probable disease resistance protein At1g63360 398 484 - -
Lele11g1056 896 Pfam NB-ARC domain 161 399 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1056 Lele-ChrLele11 17840181 17842998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1056 174 482 WRKY Transcription Factor Family AT5G45050 23.975 4.71e-12 68.2