Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1047 ATGAGTTCCGCAAGTGCAAGCCATCGCACATCATCATGGGTAATGTTTCGTGGATGGATGAAGCTTAAGGCCATGCCTGATGTTTTGAAGGAGAAGGTCCTCAATATTTATAGGACAGCCAAAGGAATAGGGCAAGATGACCCAAGAAGAATCATTCATGCCCTCAAAGTAGGACTTACGCTCACTCTGGTTTCTCTATTCTACTATTATCAGCCACTTTATGACAGTTTTGGCCTCTCTGCAATGTGGGCTGTTATGACCGTTGTTGTAGTCTTTGAATACTCTGTAGGAGCCACGCTAGGAAAAGGTTTAAACAGGGGATTAGCAACACTACTTGCTGGTGCTTTGGGTGTTGGAGCTCATTACTTGGCGGACTTATCTGGGCAGACAATAGAACCCATAGTCCTTAGCTTCTTTGTGTTTCTTCAAGCGTTTGAAGAGGAGTATTTTAGAGCATCTAAGGACGACAGGACGGCCTTGTTGGAGGGGTACAAAACTGTCCTCGATTCAAAGAGTACTGAAGAGTCATTGGCATCGCCGGAGATTAAAGGTATAATCCAGGAGGCGTGTTCGGCGATGAGTTTGGAATCGGCGAAAGCTCTGAAGGAGCTAGGAGTGGCAATGAGCACAATGAAGAAGCCATGTTTTGCGGATACACATATTTCCGACTCAAAATCTGCTGCTAAGAGCCTCAATTCATTGCTGAAATCAAGCTTATGGAAAGAAACTGATCTTTTATCAGTTCTTCCAGCAGCCACAGTGGCTTCCTTGCTATGTGATATTGTTGCCTGCACTGAGGAAATTGCAGATGCTGTGAATGAACTTCCCTCACTCACCGTGTTCGAAACTGCATCAGAAACGGCTAAACCATCAAACGGAACACAGTCTTCTACTCCAAATGGTGATAATAACTCCCACGTGGTGATTCTGGTTGAAGATTCAACTCCAACTAACTTACCAGAATCTAAATCGTTGACTGATCAACAGAACACAAACAGAGTGTGA 1005 0.4438 MSSASASHRTSSWVMFRGWMKLKAMPDVLKEKVLNIYRTAKGIGQDDPRRIIHALKVGLTLTLVSLFYYYQPLYDSFGLSAMWAVMTVVVVFEYSVGATLGKGLNRGLATLLAGALGVGAHYLADLSGQTIEPIVLSFFVFLQAFEEEYFRASKDDRTALLEGYKTVLDSKSTEESLASPEIKGIIQEACSAMSLESAKALKELGVAMSTMKKPCFADTHISDSKSAAKSLNSLLKSSLWKETDLLSVLPAATVASLLCDIVACTEEIADAVNELPSLTVFETASETAKPSNGTQSSTPNGDNNSHVVILVEDSTPTNLPESKSLTDQQNTNRV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1047 334 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 178 287 - -
Lele11g1047 334 MobiDBLite consensus disorder prediction 284 334 - -
Lele11g1047 334 Pfam Aluminium activated malate transporter 43 151 IPR020966 GO:0015743
Lele11g1047 334 Pfam Aluminium activated malate transporter 178 275 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1047 Lele-ChrLele11 17758782 17761004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1047 127 324 Miscellaneous Gene Families AT1G08440 29.502 1.38e-20 90.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1047 11 17758782 17761004 Lele30g1016 30 13595692 13596357 CCT
Lele11g1047 11 17758782 17761004 Lele31g1147 31 18094050 18094715 CCT
Lele11g1047 11 17758782 17761004 Lele32g0374 32 2328510 2329175 CCT
Lele09g1047 09 19727309 19729507 Lele11g1047 11 17758782 17761004 hybridization
Lele10g0998 10 21452163 21454146 Lele11g1047 11 17758782 17761004 hybridization