Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1046 ATGGGCTTTTTGTTGAAACAAGTTCTCAAGACACTCTGCAGTGAGAATCAATGGTCTTATGCTGTCTTCTGGAAGATCGGGCGCCATAACCCCAAGCTGTTAATTTGGGAAGATTGCTATTATGCACCCTTGACTTGTCAATTTCCTAGGGGCATCGCTGGAACAGAGACTTCTAATTTGCCTTTTGTGAGTGGGGAAGGCTTCTGGCGTTCTTCTGATTCTAATGCTTGTAATATAGGAACTGAAGAAGAGGACAGAGTCTGCGCTTTGATTAACACAATGATGGTGAATAATTCGGTCAATGTCTTGGGTGAAGGGATTATTGGGCGGGCTGCATTTACAGGAAACCACCAGTGGATTCATTTGAAGAATTTTAGAAGAGATGCATATCCGCTGGAGGTGTACAATGAGGTGCATCTCCAGTTTTCAGCTGGAATGCAGACAGTAGCAGTTATTCCTGCACTTCCTTATGGCGTTGTTCAACTTGGTTCTTTCTTGCCAATAATGGAGAACATGGGAATAGTGAATGAAGTGAAGAGCTTTACTTTGCAATTGGGGTGTGTCCCTGGTGCTCTTCCATCTGAAGACTTTTCTGAAAAGGCTTCTATCGAAAGATTTGGTAATCCTGTTACTGTTGGAATGCCTGTGTCTGTTGATCCCCCAGTAGTTACCCCCAGTCCCACACCTGCAGTAACTTATGGCTTCAACCAAGAAATCAATTTGTCTTGTACTTCAAGGCCTATTGTTCAACCAGCTCATCCTTTTAAAGGAGTGACAAATAACCATCAGGGTTCTGTATTAACACGTCAAACCCCTAACATTACTCAGATATTATCCAATTACCGCGATAATCTTTGTGAACCTTCAGCAATACCAATGATGAACCCAAATTTTGATGTACAGCCTGAGAATATAGTTATGGAGGCAGAGGTGATACCCTTGAATCTTGATTCACGTCTGCCACAACATTCTGCCTCATTGAGTGCTAGATCTGCATTCAATAAATTGACTGACTTGAGCCAATCCAGTCACTGTGGCATAAAAGTTAAGGAACAAGAAAAATTGTCTAGCTTTAGGAGTCAAAGTTATCTTAATCCAAATTTGACCGTGTCAAATCCATCGTCTCAACTGAAAAATAGTGGAGGCCATGTACTTGATCACAGTCAGATTGCTATTAGTTCTTCATCAATTCATGGTGGAACGAGCAGACTTTTGAGGCCAAATCTTATTGCCAGCTCTGTTTCTAATCCTTCTAAAGTTGCCACTGCAGATTTTTGTGAAACCAGGAAAGCTGGGCCTGGACTTCAAAATGATGGTTTAACAAAAGGAGGGCGCTACTCTCTGCCTAACTTAACCAGTCAATCTGGTACTAGTCACATGCCTCTAGAAGGTTTGGACCAGTACAATTTTCCTGTAGATTTAAAGCATGCTCATGATAAATTGGCTCCAACAGGCCAAAGAATGGATGATGATCTGCTTCAGGCCGTTAAGACCTCATCTCTTCAGCAGGTGTCTATGAGTGATCACATCCCTGTTTGTCTTCTGCCTCCATCAAGTGATGACCTATTTGATGTTTTAGGTGTGGATCTTAAAAACAAACTACTGAATGAAAACTGGAATAAGTTGCTTGCAAAAGAATCGAATGCTGGTGCTGAAATTCTGCAAAACAAGGTAACATGTTTGAGTATGCAGGATATGGATCCTGATGTTTATTCAATTAATGAAGCCATTTCAGACGGTTGTGTCTTCTCGGAGAGAGGCAACGACCATCTCCTGGATGCTGTGGTCTCAAGGGCAAAGTCTATTGGGAAACAGGATTCTGATGATATGTCTTGCTGGACAACTTTGACTAGGACTAGTAATGCTTCTGTTCCCTCTCCTGCTTATCGGAAGGTTATGTCTGATCATGCTCAGGTTGGATTCTCTGGTTTTCCTGAAGATGCGAGTAAAGCAGGTTCTGTAGAATCTAGTTCTCTTAGGTCTGGATGTAGCAGGGGTGATGCTCGAAGCTGTTCTCAAACTATTTCCATTTATGGGTCTCAACTTAGCTCATGGGTTGAGAATGCTTCAAATGAGAAGTGTGAAAATAGTGTCTCAACTGGATTCTCTAAGGGGCCTGATGAAGTTTGTAAGTCAAATCGTAAAAGGCTTAAGCCTGGGGAGAACCCCAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGCTACGAGAAATTGTGCCAAATGGGGCAAAATGTAGCATAGACGCACTTCTTGAACGTACGATCAAGCACATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTAAAACAAGCCGGGGAATCTAAGATTATGAGGAAGGAAGGTGGACTGCTTTTGAAAGACAATTTTGAGGGAGGGGCTACTTGGGCATATGAGATTGGCTCACAATCAAGGGTTTGCCCCATCATAGTAGAGGATCTGAATCCCCCTCGTCAGATGTTAGTGGAGATGCTGTGTGAAGAACGAGGTTTCTTTCTGGAAATAATTGACTTAATCCGAGGATTGGGGTTGACCATATTAAAGGGGGTGATGGAAACCCGAAATGACAAGATCTGGGCATGCTTTGCATTAGAGGCAAATCGGGACGTAACGAGGATCGAGATATTCATGTCTCTGGTCAATCTTTTGGAGCAAACAGGAAAGGGAACTGCATCTTCATCCAACCCTATATGTCAGTCCTTCCCTCAAGCCACCCAGATAGTGGCAACCGGCGGACCTAGTAGTATGCAATGA 2775 0.4299 MGFLLKQVLKTLCSENQWSYAVFWKIGRHNPKLLIWEDCYYAPLTCQFPRGIAGTETSNLPFVSGEGFWRSSDSNACNIGTEEEDRVCALINTMMVNNSVNVLGEGIIGRAAFTGNHQWIHLKNFRRDAYPLEVYNEVHLQFSAGMQTVAVIPALPYGVVQLGSFLPIMENMGIVNEVKSFTLQLGCVPGALPSEDFSEKASIERFGNPVTVGMPVSVDPPVVTPSPTPAVTYGFNQEINLSCTSRPIVQPAHPFKGVTNNHQGSVLTRQTPNITQILSNYRDNLCEPSAIPMMNPNFDVQPENIVMEAEVIPLNLDSRLPQHSASLSARSAFNKLTDLSQSSHCGIKVKEQEKLSSFRSQSYLNPNLTVSNPSSQLKNSGGHVLDHSQIAISSSSIHGGTSRLLRPNLIASSVSNPSKVATADFCETRKAGPGLQNDGLTKGGRYSLPNLTSQSGTSHMPLEGLDQYNFPVDLKHAHDKLAPTGQRMDDDLLQAVKTSSLQQVSMSDHIPVCLLPPSSDDLFDVLGVDLKNKLLNENWNKLLAKESNAGAEILQNKVTCLSMQDMDPDVYSINEAISDGCVFSERGNDHLLDAVVSRAKSIGKQDSDDMSCWTTLTRTSNASVPSPAYRKVMSDHAQVGFSGFPEDASKAGSVESSSLRSGCSRGDARSCSQTISIYGSQLSSWVENASNEKCENSVSTGFSKGPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQAGESKIMRKEGGLLLKDNFEGGATWAYEIGSQSRVCPIIVEDLNPPRQMLVEMLCEERGFFLEIIDLIRGLGLTILKGVMETRNDKIWACFALEANRDVTRIEIFMSLVNLLEQTGKGTASSSNPICQSFPQATQIVATGGPSSMQ 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1046 924 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 913 IPR043561 GO:0003700|GO:0006355
Lele11g1046 924 MobiDBLite consensus disorder prediction 431 460 - -
Lele11g1046 924 MobiDBLite consensus disorder prediction 696 731 - -
Lele11g1046 924 MobiDBLite consensus disorder prediction 644 669 - -
Lele11g1046 924 MobiDBLite consensus disorder prediction 446 460 - -
Lele11g1046 924 MobiDBLite consensus disorder prediction 651 669 - -
Lele11g1046 924 CDD bHLH_AtLHW_like 721 790 - -
Lele11g1046 924 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 717 766 IPR011598 GO:0046983
Lele11g1046 924 MobiDBLite consensus disorder prediction 708 731 - -
Lele11g1046 924 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 180 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1046 Lele-ChrLele11 17746112 17751099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1046 519 921 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.202 7.31e-117 369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1046 09 19714650 19719873 Lele11g1046 11 17746112 17751099 hybridization
Lele10g0997 10 21439688 21444873 Lele11g1046 11 17746112 17751099 hybridization