Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1044 ATGGCAGAAATCGAAGTTCCTCAATATTTCGCTTGTCCTATTTCTCTTGAGATTATGAAAGATCCTGTGACGACCGTCACAGGTATAACCTACGACAGAGACAGCATCGAACAGTGGTTGCTGACGGCGAAGGAGAGAAATTGCCCAGTCACCAAGCAGCCATTGCCACCTGATTCAGCCTTGACTCCTAACTCTACCTTACTCAGGCTAATCCAAGCTTGGTCCTCACAAATTGCCCAAAACAGCGTCGTTCGGGTTCCATCATCCCCGAAACCCCTTCTTCTCACGTCCTTCCACGTTCACAAGCTCATTTCTGATCTTCAGATTCCTCATCTTTATCAAACGGCATTGAGAAAAATCGATTCTTTGGCCAAACACAGCGAAAGCAACAGAAGGTGCATGGTGGAATCTGGAGTACTCCATGCCATGGTTTCCATAATTACTCGAAGTTTCATGGAAGGTATAACGAATTGTCTCGAAGAAGCTTTGAGAATTTTCCATTTACTATTGGCTGAATCGTCATCCCTGGCTCATATGAAGCCTCTGTTTTATGAAAACTTAGATTTTATTATCACCTCGTTGACCACCTGGGCTTTGCAAGTTGACGTCAGCAACAACGTTAATATAGTAAACGAAACAATTCCCGTTTTGAAATCGATCATTGAAGCAGCAGATTCAACCCTTCTGGGAAACTTAAAGGTTGAATTTTTCAGAGGAATAATAACAAGGGTGCTAAAGAACAGAAGAGTCTCGGAACAAGCTATAAAATCAGCCTTGGAAGTTCTCATAGAAACGTGCCCATTAGGAAGAAACAGAACGAAAATCGTAGAATCAAGTGCAGTTTCTGAATTAATTGATCTTGAGTTAGAGAAACCAACGAAGAAGATAACGGAGTTAGTGTTCAACCTTCTTGCACATCTATGTTCATGTGCTGAAGGGAGAGAACAGTTTCTGCAACATGCAGCGGGAATCGCTGTGATATCTAAGAGAATTCTGAGGGTTTCCAATGTAACAGATGATCGAGCTGTTCATGTACTTTCGTTGATAACTAAGTACTCGTCTTCGAACGATGTCGTTTTGGAGATGTTGAGAGTGGGAGCTGTGTCTAAGCTTTGCATGGTGATGCAAGCTGATTGTGCTTTGTATCTGAAGGAGAAAGCAAGACGTATCCTTAGGTTACACTCCAAAACTTGGAATAATTCTCCTTGCATTCAAGTTTATTTGCTAACCAGACACCAAAGGTGA 1245 0.4217 MAEIEVPQYFACPISLEIMKDPVTTVTGITYDRDSIEQWLLTAKERNCPVTKQPLPPDSALTPNSTLLRLIQAWSSQIAQNSVVRVPSSPKPLLLTSFHVHKLISDLQIPHLYQTALRKIDSLAKHSESNRRCMVESGVLHAMVSIITRSFMEGITNCLEEALRIFHLLLAESSSLAHMKPLFYENLDFIITSLTTWALQVDVSNNVNIVNETIPVLKSIIEAADSTLLGNLKVEFFRGIITRVLKNRRVSEQAIKSALEVLIETCPLGRNRTKIVESSAVSELIDLELEKPTKKITELVFNLLAHLCSCAEGREQFLQHAAGIAVISKRILRVSNVTDDRAVHVLSLITKYSSSNDVVLEMLRVGAVSKLCMVMQADCALYLKEKARRILRLHSKTWNNSPCIQVYLLTRHQR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1044 414 Gene3D - 108 397 IPR011989 -
Lele11g1044 414 SMART Ubox_2 9 74 IPR003613 GO:0004842|GO:0016567
Lele11g1044 414 SUPERFAMILY RING/U-box 4 77 - -
Lele11g1044 414 Pfam U-box domain 6 77 IPR003613 GO:0004842|GO:0016567
Lele11g1044 414 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 85 IPR013083 -
Lele11g1044 414 ProSiteProfiles U-box domain profile. 5 81 IPR003613 GO:0004842|GO:0016567
Lele11g1044 414 PANTHER WDSAM1 PROTEIN 3 405 IPR045185 GO:0061630
Lele11g1044 414 SUPERFAMILY ARM repeat 110 392 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1044 Lele-ChrLele11 17660218 17661462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1044 3 411 U-box Gene Family AT3G11840 40.576 2.71e-91 281