Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1039 ATGGATGTCGATTCCTCGATGGCACCGGAAAGCGATCACGATCGTGCCGTGCAAAATCATACTGCTAGTCAGGCTCCGGAAACTATAGATAGAGAGCCGCCAGGAGAGGAGCCGTCGTTCGGAGGCGGGTCTCAGGCACAGTCGCCAGCGCAGCAGCAACAACAACAGCAGGCGGCTGCTCAGGTGCAGCAGAATCCTGTTGTTGGACCTAGGCTGGCCCCAACTTACACTGTCGTGAATGCAATTTTAGAAAAGGAGGAGGATGGGCCAGGGCCGAGGTGCGGCCATACTTTGACGGCGGTGGCAGCTGTTGGAGAGGAGGGTACTCCTGGATACATTGGTCCGAGGCTGATTTTGTTTGGTGGTGCCACTGCACTTGAAGGGAATTCTGCGGCTGCTGGGACTCCTTCATCTGCCGGGAATGCTGGCATACGTTTAGCTGGTGCGACGGCTGATGTACACTGCTATGATGTCTTGACTAACAAATGGTCTAGGATAACTCCCTATGGAGAACCTCCAACCCCAAGGGCTGCACATGTTGCAACTGCTGTAGGAACAATGGTAGTTATTCAGGGTGGCATTGGCCCTGCTGGTTTGTCAGCAGAGGACCTACATGTTCTTGATCTCACTCAGCAACGGCCACGATGGCACAGAGTCGTTGTTCAAGGCCCTGGACCAGGGCCACGTTATGGACATGTGATGGCTTTGGTGGGGCAGAGGTATCTTATGGCAATTGGAGGAAATGATGGAAAAAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTACGAATGGCATAAGTTGGAGCCAGAAGGAGAAGGCCCGCCCCCATGCATGTATGCAACTGCTAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGAAGGGACACCAATAGTGTGCCACTGGCTAGTGCATATGGACTTGCGAAGCATAGGGATGGTAGATGGGAATGGGCAATTGCCCCTGGTGTTTCACCATCTCCAAGATATCAGCATGCAGCAGTATTCGTTAATGCAAGGCTGCATGTGTCTGGAGGAGCTCTTGGTGGCGGGCGCATGGTAGAAGACTCATCAAGTGTGGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTCACCAGTCCAAGGACTGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAATTGACAAGGCGTTGTAGGCATGCTGCTGCTGCCATTGGTGACCTTATATTTATTTATGGAGGTTTACGTGGCGGAGTATTGCTCGATGACCTACTTGTTGCTGAAGATCTCGCTGCTGCTGAAACAATAAATGCTGCTGCATATAATGTACAAGCAGGACGATTACCTGGGCGATATGGATTTGTTGATGATAGGAACAGGCAAACAATGTCTGAAGCAACTGCTGATGGTTCAGTTGTTCTGGGAAATCCTGTGGCTCCCCCGATAAATGGTGACATTTATACTGATATCAGCACTGAGAATGCCATGCTCCAGGGAACCCGGAGGACTAACAAAGGTGTTGAGTATCTTGTTGAAGCATCAGCAGCAGAAGCTGAAGCTATAAGTGCTACATTAGCTGCTGCTAAAGCACGTCAAGAGAATGGAGAAGTTGAATTACCTGATAGAGACCGTGGGGCCGAGGCTACCCCTAGTGGGAAACCAATATCTTCCCTGATTAGGCCTGATTCAGCAGACCCAACTGATATTGTTCCTGGTGGAGTTCGGCTGCATCATAGAGCTGTTGTCATAGCTGCAGAGACTGGTGGAGCATTAGGTGGTATGGTTAGACAGCTTTCAATTGATCAGTTTGAAAATGAAGGCAGGCGAGTCAGTTATGGAACTCCAGAAAGTGCAACTGCAGCTAGAAAATTATTAGATCGGCAGATGTCCATCAATAGTGTCCCAAAGAAGGTCATAGCTCACCTATTAAAACCTCGAGGCTGGAAACCACCGGTTCGCCGACAGTTTTTTTTAGATTGCAATGAAATTGCAGATCTTTGTGATAGCGCAGAGCGGATATTTTCAAGTGAACCAACTGTTTTACAACTTAAGGCACCAATTAAAATATTTGGTGATTTACATGGGCAATTTGGGGATCTCATGCGTCTTTTTGATGAATATGGTGCACCATCAACTGCTGGTGACATAGCATACATCGATTATCTATTCTTAGGAGATTATGTTGATCGGGGTCAACACAGCCTGGAAACTATAACCCTTCTACTTGCTCTGAAGGTTGAATATACCAACAATGTACACTTGATACGTGGAAATCATGAAGCTGCGGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGCGAGAGGGATGGAATTTGGGCATGGCATCGGATTAATCGTTTGTTTAATTGGCTTCCCCTGGCGGCCCTAATTGAGAAAAAGATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCACGTGGAACAGATTGAAAATCTTCAGCGTCCAATCACAATGGAAGCAGGGTCAATTGTGCTGATGGATCTATTATGGTCTGATCCTACAGAGAATGACAGTGTAGAAGGACTGCGGCCAAATGCTAGGGGTCCAGGGTTAGTTACTTTTGGGCCGGACCGTGTCATGGAATTCTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCCCATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCTCAGGGACATTTGATCACTCTATTCTCAGCTACAAATTACTGTGGTACTGCAAATAATGCTGGGGCGATATTAGTCTTGGGCAGAGATCTTGTTGTGGTTCCTAAATTGATTCATCCATTACCACCTGCACTTTCCCCGGAAGCATCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAATAGACCACCGACTCCAACTAGAGGTCGTCCTCAAGTTGCTAATGATCGAGGTTCACTTGCTTGGATATGA 2997 0.4788 MDVDSSMAPESDHDRAVQNHTASQAPETIDREPPGEEPSFGGGSQAQSPAQQQQQQQAAAQVQQNPVVGPRLAPTYTVVNAILEKEEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAAAGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWHKLEPEGEGPPPCMYATASARSDGLLLLCGGRDTNSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETINAAAYNVQAGRLPGRYGFVDDRNRQTMSEATADGSVVLGNPVAPPINGDIYTDISTENAMLQGTRRTNKGVEYLVEASAAEAEAISATLAAAKARQENGEVELPDRDRGAEATPSGKPISSLIRPDSADPTDIVPGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYTNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSPEASPERHIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1039 998 FunFam Serine/threonine-protein phosphatase 632 971 - -
Lele11g1039 998 Gene3D - 632 972 IPR029052 -
Lele11g1039 998 SMART pp2a_7 668 952 IPR006186 GO:0016787
Lele11g1039 998 Gene3D - 72 199 IPR015915 GO:0005515
Lele11g1039 998 Pfam Calcineurin-like phosphoesterase 696 903 IPR004843 GO:0016787
Lele11g1039 998 MobiDBLite consensus disorder prediction 1 64 - -
Lele11g1039 998 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 998 - -
Lele11g1039 998 Gene3D - 200 438 IPR015915 GO:0005515
Lele11g1039 998 SUPERFAMILY Kelch motif 148 437 IPR015915 GO:0005515
Lele11g1039 998 SUPERFAMILY Metallo-dependent phosphatases 653 953 IPR029052 -
Lele11g1039 998 FunFam Serine/threonine-protein phosphatase 72 269 - -
Lele11g1039 998 MobiDBLite consensus disorder prediction 41 64 - -
Lele11g1039 998 MobiDBLite consensus disorder prediction 1 17 - -
Lele11g1039 998 PIRSF STPPP_BSU1 41 998 IPR012391 GO:0004721|GO:0009742
Lele11g1039 998 MobiDBLite consensus disorder prediction 542 576 - -
Lele11g1039 998 MobiDBLite consensus disorder prediction 544 558 - -
Lele11g1039 998 CDD MPP_Bsu1_C 648 950 IPR041758 -
Lele11g1039 998 PRINTS Serine/threonine phosphatase family signature 914 930 IPR006186 GO:0016787
Lele11g1039 998 PRINTS Serine/threonine phosphatase family signature 802 828 IPR006186 GO:0016787
Lele11g1039 998 PRINTS Serine/threonine phosphatase family signature 892 912 IPR006186 GO:0016787
Lele11g1039 998 PRINTS Serine/threonine phosphatase family signature 764 788 IPR006186 GO:0016787
Lele11g1039 998 PRINTS Serine/threonine phosphatase family signature 696 723 IPR006186 GO:0016787
Lele11g1039 998 PRINTS Serine/threonine phosphatase family signature 731 758 IPR006186 GO:0016787
Lele11g1039 998 PRINTS Serine/threonine phosphatase family signature 832 859 IPR006186 GO:0016787
Lele11g1039 998 Pfam Kelch motif 334 380 IPR011498 GO:0005515
Lele11g1039 998 MobiDBLite consensus disorder prediction 974 998 - -
Lele11g1039 998 ProSitePatterns Serine/threonine specific protein phosphatases signature. 765 770 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1039 Lele-ChrLele11 17576480 17591225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1039 660 895 Calmodulin-binding Proteins AT5G63870 28.676 6.42e-25 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1039 11 17576480 17591225 Lele29g0404 29 2443016 2448690 CCT
Lele11g1039 11 17576480 17591225 Lele30g1006 30 13526029 13531348 CCT
Lele11g1039 11 17576480 17591225 Lele31g1139 31 18036311 18041910 CCT
Lele11g1039 11 17576480 17591225 Lele32g0385 32 2386235 2391359 CCT
Lele31g1147 31 18094050 18094715 Lele11g1039 11 17576480 17591225 CCT
Lele32g0374 32 2328510 2329175 Lele11g1039 11 17576480 17591225 CCT
Lele09g1037 09 19557237 19566928 Lele11g1039 11 17576480 17591225 hybridization
Lele10g0989 10 21258600 21274098 Lele11g1039 11 17576480 17591225 hybridization