Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1033 ATGGATATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATCCTAGCGGTAAGTGTTCCAAGCAGCAGTTTCCTTACCATAGTGACGGTTCGATGTGGGCATTGTGCTAATTTACTGTCAGTCAACATGGGAGCTTCTCTTCAAACATTCCCTCCTCAAGAGCTTCAGCTAAGCTTTGAAGAATCAAGCAACAGAGAAGAGGGATCATCATCTTCAAAATGCAGTAAATTTGCTGCATTTGAGTCTGCAGAGCATGAACAACATAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGAGTTCCTTCTGCTTATAACCGGTTCATCAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAGGCGTTTAGCACGGCGGCCAAAAACTGGGCACATTTTCCTCACATTCACTTTGGATTAAAGCTGGACGGCAACAAGCAAGGAAAGTTGGACCCGGAAGAAGGAACTCAAAAATCTAATGGCCTTTATTGA 531 0.4482 MDMMATERVCYVHCNFCNTILAVSVPSSSFLTIVTVRCGHCANLLSVNMGASLQTFPPQELQLSFEESSNREEGSSSSKCSKFAAFESAEHEQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQGKLDPEEGTQKSNGLY 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1033 176 Gene3D High mobility group box domain 75 149 IPR036910 -
Lele11g1033 176 MobiDBLite consensus disorder prediction 155 176 - -
Lele11g1033 176 PANTHER PROTEIN YABBY 6-RELATED 5 162 IPR006780 GO:0007275
Lele11g1033 176 FunFam Axial regulator YABBY 98 168 - -
Lele11g1033 176 MobiDBLite consensus disorder prediction 86 108 - -
Lele11g1033 176 Pfam YABBY protein 5 153 IPR006780 GO:0007275
Lele11g1033 176 MobiDBLite consensus disorder prediction 86 102 - -
Lele11g1033 176 SUPERFAMILY HMG-box 97 146 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1033 Lele-ChrLele11 17516159 17522020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1033 4 176 C2C2-YABBY Transcription Factor Family AT1G08465 66.298 2.36e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele11g1033 YABBY 7.4e-71 CL0114