Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1032 ATGGTTTCTCGCATCTATGGCGTCGCCAAGCTCCTCATCTTCCTTCTTCTTCTTCTCTTCGGGTTCCCACTTGCATTGTCGGAAATGCCAAATCCCAGGTCGTCTGTCTCTTCTTCGGTCAGCTCCGGTCAGATAAACTCCAACTCGGTTCTGGTGGCTCTTCTTGACTCGCATTACACGGAACTTGCTGAGCTTGTGGAGAAGGCTATGCTCTTGCAGACTCTGGAGGATACGGTCGGCAGCCACAATATCACCATCTTCGCACCCAGAAATGAAGCTCTCGAACGCGATCTCGACCCGGAGTTCAAGCGCTTCCTTCTCGAACCCGGTAATCTCAAGTCTCTGCAGACTTTACTAATGTTCCATATCATTCCTACCAGAATCGGATCAGAGCAGCTTCTGACTCGGACCGGGTTGGCCCGTCACGATACGCTTTCCAATGATTATCTGCATCTTGAGAACAATGGGACTACGGAATGGACAGTAGATCGCGCCAAGATTATCCAACCTGATGCGGTGACCCGACCCGATGGCGTCATCCACTGGATTGAGCGCCTCTTGGTGCCACGTTCAGTGCAGGATGACTTCAACCGCCGGAGAAGCCTTCAGTCTATCACGGCGGTGAAGCCAGAGGGAGCACCGGAAGTGGACCCGAGGACTCATCGGCTCAAGAAACCCTCCCCACCGGCCAAACCCGGTTCTCCTCCTGCTTTGCCAATCTACGATGCAATGGCTCCTGGACCCTCACTAGCTCCTGCTCCAGCACCGGGACCAGGCGGCCCCCACCACCACTTCAACGGTGAAGCTCAGGTGAAGGATTTCATTCAGACACTTCTCCATTACGGCGGGTACAATGAAATGGCAGATATATTGGTGAATCTAACATCCTTAGCCACCGAAATGGGTCGACTCGTCTCCGAGGGGTACGTGCTCACCGTTTTGGCTCCCAATGATGAGGCCATGGCTAAATTAACCACCGACCAATTGAGTGAACCAGGCGCACCGGAACAGATTATCTATTACCATCTCATACCGGAGTATCAAACAGAAGAGAGTATGTACAATGCAGTCCGACGGTTCGGTAAGGTCCGGTATGATACCCTACGGTTGCCGCATAAGGTGGTGGCTCAGGAGGCAGATGGATCGGTCAAATTCGGGCAGGGAGACGGGTCGGCGTATTTGTTCGACCCGGATATCTATACGGATGGGCGGATCTCGGTTCAGGGCATCGATAACGTATTGTTGCCACAGGATGAGGAGGAGACGAAGCCCATTAACAGAACGGTTCAACCCGCTAAGGCCGTAGTCAAGCACAGAAGAGGAAAATTGCAGGAGGCAGCGTGCTGGGTGCTCGGAACCATTGGACAACATGGTAGATTCCTCCCTTGCCAATGA 1395 0.5319 MVSRIYGVAKLLIFLLLLLFGFPLALSEMPNPRSSVSSSVSSGQINSNSVLVALLDSHYTELAELVEKAMLLQTLEDTVGSHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPTRIGSEQLLTRTGLARHDTLSNDYLHLENNGTTEWTVDRAKIIQPDAVTRPDGVIHWIERLLVPRSVQDDFNRRRSLQSITAVKPEGAPEVDPRTHRLKKPSPPAKPGSPPALPIYDAMAPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDNVLLPQDEEETKPINRTVQPAKAVVKHRRGKLQEAACWVLGTIGQHGRFLPCQ 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1032 464 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 3 456 IPR044654 -
Lele11g1032 464 ProSiteProfiles FAS1/BIgH3 domain profile. 271 399 IPR000782 -
Lele11g1032 464 SUPERFAMILY FAS1 domain 250 417 IPR036378 -
Lele11g1032 464 MobiDBLite consensus disorder prediction 203 265 - -
Lele11g1032 464 Pfam Fasciclin domain 58 189 IPR000782 -
Lele11g1032 464 Pfam Fasciclin domain 296 416 IPR000782 -
Lele11g1032 464 Gene3D FAS1 domain 50 190 IPR036378 -
Lele11g1032 464 ProSiteProfiles FAS1/BIgH3 domain profile. 46 187 IPR000782 -
Lele11g1032 464 Gene3D FAS1 domain 290 416 IPR036378 -
Lele11g1032 464 MobiDBLite consensus disorder prediction 228 242 - -
Lele11g1032 464 FunFam Fasciclin-like arabinogalactan protein 16 266 417 - -
Lele11g1032 464 SMART fasc_3 312 417 IPR000782 -
Lele11g1032 464 SMART fasc_3 85 190 IPR000782 -
Lele11g1032 464 SUPERFAMILY FAS1 domain 50 190 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1032 Lele-ChrLele11 17498418 17501019 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1139 31 18036311 18041910 Lele11g1032 11 17498418 17501019 CCT
Lele32g0385 32 2386235 2391359 Lele11g1032 11 17498418 17501019 CCT
Lele09g1029 09 19469420 19472018 Lele11g1032 11 17498418 17501019 hybridization
Lele10g0982 10 21113995 21116420 Lele11g1032 11 17498418 17501019 hybridization