Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1026 ATGAATGGCGGTGGCAAGAGGTCTCCCTTTCAGGTGAACCTCAATTATTCCCTGCAAGACGAAGGATCTCCCACTGATCATGAAAATGAGCCTTCTGATCATCATGATCATGACGACCTTAGAGCCCACATCCACGAAATGGATTTCTTCTCCAACAAGTACGACAAGCTCGCCGCCTCCTCCTCCTCCAGCTCCGCCCCCTCCGCCCTTCCCAGACTTGATTTCCTATCCCCACCACCGCCCTTGCCCTTTAATGTCAACACTGGTTTAAATCTTCTTACTACCAATCTTGGTAGTAATCATTCTGCAGTAGAAGATGGTTTATCAATCCCAGTACTTAAAACGGCTCAAGAAGAGTATGATGCTATTAGAGCACGGTTTAAGCAAATGAAGGATGAAAACGATCGGTTGAGAGAAATTCTCAACGAAGTTACTACTAATTACAATGGGCTGCGTACTCGATACATGAATATAGTGCAGAAGCAGAACATCAACAACAACAATGGTGAAGACATGTTTGACGAGAACGGAAGAAACAAACGATTAATCGAAGGAGCATCATCTTCAGAACCTAGACAATTTATGGATCTTGGACTTGCCACTAATAATGTTGTTAATGTTGATAAATCTTCTCTTTCCAAGGATTTTGACTCCAGAAAGAGTCAAATCAGCGATGCAAGACTTGTGCTTGGACAAGAAAAGAAAGAACTTGGTAAGAATATTATAAGAGATGACGACGATAGCCCACCAGCTCAAGCTTTCTCCACTAATAATAATAATAATAATAATATCCCAAAAGTCAGTCCTCCGGAAACTGTTGATCAAGCAGAGACTACTATGAGAAAGGCAAGAGTTTCAATTCGAACTCGATCGGAAGACGCCATGGTACAAAGATGTGCTGAGGACAAAACAATCATGATCACAACCTACGAAGGAAATCATAACCATCCTTTGCCTCCGGCGGCGATGGCGATGGCGCAGACAACCTCGTCAGCTGCTAGATATTTGCTGTCAGGATCATCGTCAAGTTCGGATGGTTTAATGAATCCAAATTTTCTCGCAAGGACTTTGCTTCCTTTTTCCTCTGGCATGGCTACTATCTCAGCTTCGGCTCCGTTTCCCACTGTTACATTGGACTTAACCCAGAACCCTAACCCTTTTCTCTTCCCGAGGCCTCCGATGCCGTTTCCAATTCCATTCGCACCTCACAACTTGATCAATTCTCCGACTTCAATTCTGCCTCAGATATTTGCTCCGGGGGCGGCGATTTACAATCAGTCCAAGTTTTCAGGGCTTCAAATGTCTCAAGATCATGACGCTTCCACATCGTCTCAGACGCCGCCGCCGCCGCAGCAACTGGCTGATTCCAAAGCCATTTAA 1380 0.4464 MNGGGKRSPFQVNLNYSLQDEGSPTDHENEPSDHHDHDDLRAHIHEMDFFSNKYDKLAASSSSSSAPSALPRLDFLSPPPPLPFNVNTGLNLLTTNLGSNHSAVEDGLSIPVLKTAQEEYDAIRARFKQMKDENDRLREILNEVTTNYNGLRTRYMNIVQKQNINNNNGEDMFDENGRNKRLIEGASSSEPRQFMDLGLATNNVVNVDKSSLSKDFDSRKSQISDARLVLGQEKKELGKNIIRDDDDSPPAQAFSTNNNNNNNIPKVSPPETVDQAETTMRKARVSIRTRSEDAMVQRCAEDKTIMITTYEGNHNHPLPPAAMAMAQTTSSAARYLLSGSSSSSDGLMNPNFLARTLLPFSSGMATISASAPFPTVTLDLTQNPNPFLFPRPPMPFPIPFAPHNLINSPTSILPQIFAPGAAIYNQSKFSGLQMSQDHDASTSSQTPPPPQQLADSKAI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1026 459 Gene3D WRKY domain 258 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele11g1026 459 MobiDBLite consensus disorder prediction 241 277 - -
Lele11g1026 459 ProSiteProfiles WRKY domain profile. 296 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele11g1026 459 MobiDBLite consensus disorder prediction 1 37 - -
Lele11g1026 459 MobiDBLite consensus disorder prediction 433 459 - -
Lele11g1026 459 MobiDBLite consensus disorder prediction 1 22 - -
Lele11g1026 459 MobiDBLite consensus disorder prediction 250 275 - -
Lele11g1026 459 Coils Coil 113 147 - -
Lele11g1026 459 MobiDBLite consensus disorder prediction 433 452 - -
Lele11g1026 459 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 117 296 IPR044810 GO:0003700
Lele11g1026 459 MobiDBLite consensus disorder prediction 23 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1026 Lele-ChrLele11 17415959 17419107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1026 33 434 WRKY Transcription Factor Family AT4G22070 38.298 4.47e-61 206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1128 31 17923364 17933343 Lele11g1026 11 17415959 17419107 CCT
Lele32g0398 32 2518085 2521142 Lele11g1026 11 17415959 17419107 CCT
Lele11g1026 11 17415959 17419107 Lele11g1026 11 17415959 17419107 ECH
Lele10g0976 10 21021013 21023317 Lele11g1026 11 17415959 17419107 hybridization