Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1015 ATGACTTGGAAGAACAGAAGTGAGCAATCTTCCAGGAGCCTTGTGTCGCAGAAATGGGCTCTTTTTCTGTGTCTCGCAAGTTTCTGTGCCGGCATGCTCTTCACTAACAGGATGTGGACTATTCCCGAACCTAAAGGGCTTGCAAGAACAACAGCCATGGAAGCAGAACAATTGAATGTGGTTTCTGAGGGTTGTAATTCGCGAATTTTGCAAGAGAAGGAAGTGAAGCGTGACACTAAAAACATATATAAGGAAGTTTCCAAGTCTCATACTTCCATACAAACTTTGGATAAAACAATTTCAAACCTAGAGATGGAATTAACTGCTGCAAGAGCAGCTCAGGAGTCTATAAGAAATGGTGCTCCTGTATCAGGAGATGCTCTTAGGAGAGCTGAATCTGAATCTGAATCATCTGGTAAAAGAAGGTACCTAATGGTCATAGGAATAAACACTGCTTTTAGCAGCAGGAAAAGAAGAGACTCAGTTCGTTCCACCTGGATGCCGCAAGGTGAAAAAAGAAGGAAACTAGAGGAAGAGAAGGGCATTGTTGTCCGCTTTGTGATTGGTCACAGTGCTACTTCTGGGGGAATCCTAGACAGAGCTATTGAAGCAGAGGACAACAAGCATGGAGATTTCTTGAGACTGGACCATGTTGAGGGATACCTTGAATTGTCAGCAAAGACGAAGACATACTTCGCGACTGCTGTTAAATTATGGGATGCTGATTTCTATGTCAAAGTTGATGATGATGTTCATGTAAATATAGGAACACTAGGAGAAACTCTGGTTAGGCACCGTCCAAAACGAAGGATATACATCGGTTGCATGAAATCTGGCCCCGTCCTTTCTCAAAAAGGGGTAAGGTACCATGAACCTGAATATTGGAAATTTGGTGAGACTGGAAACAAATACTTCCGTCACGCCACGGGACAGTTGTATGCCATTTCCAAAGATTTGGCTACATATGTATCAAATAACCAGCAAGTTCTTCACAAGTATGCTAATGAGGATGTGTCACTAGGAGCTTGGTTTATTGGACTTGATGTGGCGCATATAGATGATCGAAGACTTTGCTGTGGCACTCCCCCAGATTGTGAGTGGAAGGCCCAAGCAGGGAACGTATGTGTTGCTTCATTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCCGATAGGATCAAAGAGGTTCATAGGCGATGTGGAGAAAGTGAGAAGGCTTTGTGGAAAGCCTCTTTCTAG 1239 0.4366 MTWKNRSEQSSRSLVSQKWALFLCLASFCAGMLFTNRMWTIPEPKGLARTTAMEAEQLNVVSEGCNSRILQEKEVKRDTKNIYKEVSKSHTSIQTLDKTISNLEMELTAARAAQESIRNGAPVSGDALRRAESESESSGKRRYLMVIGINTAFSSRKRRDSVRSTWMPQGEKRRKLEEEKGIVVRFVIGHSATSGGILDRAIEAEDNKHGDFLRLDHVEGYLELSAKTKTYFATAVKLWDADFYVKVDDDVHVNIGTLGETLVRHRPKRRIYIGCMKSGPVLSQKGVRYHEPEYWKFGETGNKYFRHATGQLYAISKDLATYVSNNQQVLHKYANEDVSLGAWFIGLDVAHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSADRIKEVHRRCGESEKALWKASF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1015 412 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Lele11g1015 412 FunFam Hexosyltransferase 137 358 - -
Lele11g1015 412 Pfam Galactosyltransferase 157 354 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele11g1015 412 Coils Coil 93 113 - -
Lele11g1015 412 Gene3D - 138 355 - -
Lele11g1015 412 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 97 351 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1015 Lele-ChrLele11 17259513 17263001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1015 1 412 Glycosyltransferase AT1G05170 76.942 0.0 691
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1015 11 17259513 17263001 Lele29g0436 29 2659263 2661703 CCT
Lele11g1015 11 17259513 17263001 Lele30g0970 30 13293623 13296095 CCT
Lele11g1015 11 17259513 17263001 Lele31g1111 31 17810672 17813129 CCT
Lele11g1015 11 17259513 17263001 Lele32g0417 32 2629869 2632289 CCT
Lele11g1015 11 17259513 17263001 Lele11g1015 11 17259513 17263001 ECH
Lele09g1011 09 19179837 19183327 Lele11g1015 11 17259513 17263001 hybridization
Lele10g0970 10 20934551 20938100 Lele11g1015 11 17259513 17263001 hybridization