Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1006 ATGGCTGTGCCTCGAATAATTTGGATTTGGATAATCCTTTGTGGTGGTCTTGCTTGTTGCCAAAGGCCAGCGTTTGTGAATATTGGCGCGGTTTTCACGTTTGATTCAGTCATAGGTAGAGCTGCAAAGGTGGCGATGCAAATGGCTGTCGATGACGTCAATGCAGACCCCGTAGTTCTTAATGGGACGAAACTGAACTTGCTAATGGAGGATGCTAGTTGCAACGTCTTCTTGGGATCGATTGGAGCGTTTCGTGCACTTGAGCAAGGGGTTGCGGCCATAATTGGTCCACAATCATCTTCCATCTCTCATGTGATTGCTCAAATAGCTAATGGTCTTCAAGTGCCTCAAGTTTCCTATGCTTCCACTGATCCAACCCTGTCGGCGCTCCAATTTCCTTTCTTTTTTCGCTCTATACCAAGTGACTCTGTGCAAATGACTGCAGTGGCTGATTTAATTGACTTCTATGGATGGAAAGAGGTCATTGCCCTCTTCTTGGATGATGATTATGGAAGAAATGGAATATCTGCTCTGGGTGATGAACTTGAAAAACGGAGGATGAGGATTTCTCATAAGTTGCCTATTAGCATTAAGTTTGATCTGAATGAAATCACTAACTTGCTCAATCATTCCAAAGTGTTTGGTCCTCGTGTGTATGTTGTTCATGTCAACCCAGATCCTAGATTAAGAATTTTTAACATAGCCTACAAACTGAAAATGATGTCTAGTGACTTTGTCTGGCTTGTCACTGATTGGCTCTCGGCTACTCTTGATTCATTCTCCCCACAGAATCAGACCTCTCTCAGTGTTGTGCAAGGGGTGGTTGGATTTCGTCCATACATTCCAGACTCTTCCCAGAAAAGAGCTTTCATTTCTCGGTGGATAAAAATGCAGAATGAAAGCGAGGCAAGCATCGGGTTAAACCATTACGGATTTTATGCATATGATTCAATTTGGGCTGTTGCGCATGCAATTGACAAGTTTATTGAAATACACGGGAATTTTACATTCTCGGTCAATAATAACTCGAGACTATTGAATAAAGAAGCAGCTGATATACGGCTTGACAAGCTCAAAGTCTTCACAGGTGGATCTGATCTGATCAACATATTATTGCAATCAAATTATACTGGTGTGAGCGGTCACCTTCAATTTAGTCCAGACAGGAATATTGTTAGTAGCAGCTATGAAGTTATCAATATCAATCCAATGGAAGAAATTACCCGGGTTGGATATTGGTCTAATGATTTTGGATTTTCAGTGGCACCACCTGAAACTCGTAAGAAGAGGGGACATGGTAGGGTTCCCCAAGATCAGAAGCTTAACATGATCACTTGGCCAGGTGGAATGACAGGAAGACCGCGTGGCTGGGTGATTGCTGATAATGCAAGGCCACTAAGAATTGGAGTTCCCAAGAGAGCAAGTTTTGTTGAGTTTGTCACTGAGCTTCCTGGTAGTCATCAAATTCAAGGGTACTGCATTGATATTTTCAAGAAAGCACTGGAGTTTGTACCATATGATGTTCCTTATGTATTTAAGCCTTTTGGGAATGGTCAATCGAATCCCAATTATGACGCTCTTGTGAAGATGGTTGCTGACAATGAATTCGATGCGGTTGTTGGAGACATAGCGATTGTGACAAACCGTACGAGGATTGTGGATTTTTCTCAGCCTTTCGCATCAACTGGTCTTGTTATAGTGGCTCCAATCAAGAATTGGAAATCAAGTGCTTGGGTATTCCTCAAACCATTTTCGGCAGATATGTGGGTTGTCACTGCAGCTTCATTTATAATGATTGGAGTAGTTATATGGATTCTTGAGCACCGAATCAATGATGATTTCCGTGGTCCTCCTAAGAGGCAAATTGTGACGATGTGCTTGTTCAGCCTCTCAACTCTGTTTAAGACAAATAAGGAAAATACGATAAGCTCACTTAGTCGAATGGTGATGATAGTATGGCTTTTTCTGTTGATGGTGATCACGGCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAGCAGCTTTCATCGCCCATCACCGGCATCGATAGCTTGATTGCAAGTAACCCCGAGGAATACGCAAGAGCTCTGCAGCTAGGTCCTTCTCGTGGAGGAGTGGGAGCTATAATCGATGAGCTTCCATACATAGAGCTATTTCTTTCAACACAAACTGATTTTGGTATTATTGGACACCCATTTACCAAAAGCAGCTGGGGCTTTGCATTTCAAAGAGAGTCTCCTCTGGCGCTTGATATGTCTACAGCAATTCTGAAACTCAATGAGAACGGAGAGCTTCAGAAGATACGAGAGCGATGGTTCTGTAAAATGGACTGTCCTGAAGAAAGAAGAAGCCACTCAGAACCTAATAAACTTCACTTGATCAGCTTCTGGGGTCTTTATCTCTCATGTGGTATCATCACACTCGCTTCTTTGCTCGTGTTTCTTCTGCGAACAATTCGCCAATACATGCGATACAAGCAAAAACAGAAAGAAAATAATCCTTCTGGATCACGTGAAGCATCTGGTGGTAAATGTTCCCAAGTTATCTATAGCTTCTTTAATTTCATTGATGAGAAAGAAGAAGCCATCAAGAAAATGTTCACTCAGTGTGATGAGAATCCAGAAATCCAGCAGCCCACCTGA 2649 0.4239 MAVPRIIWIWIILCGGLACCQRPAFVNIGAVFTFDSVIGRAAKVAMQMAVDDVNADPVVLNGTKLNLLMEDASCNVFLGSIGAFRALEQGVAAIIGPQSSSISHVIAQIANGLQVPQVSYASTDPTLSALQFPFFFRSIPSDSVQMTAVADLIDFYGWKEVIALFLDDDYGRNGISALGDELEKRRMRISHKLPISIKFDLNEITNLLNHSKVFGPRVYVVHVNPDPRLRIFNIAYKLKMMSSDFVWLVTDWLSATLDSFSPQNQTSLSVVQGVVGFRPYIPDSSQKRAFISRWIKMQNESEASIGLNHYGFYAYDSIWAVAHAIDKFIEIHGNFTFSVNNNSRLLNKEAADIRLDKLKVFTGGSDLINILLQSNYTGVSGHLQFSPDRNIVSSSYEVININPMEEITRVGYWSNDFGFSVAPPETRKKRGHGRVPQDQKLNMITWPGGMTGRPRGWVIADNARPLRIGVPKRASFVEFVTELPGSHQIQGYCIDIFKKALEFVPYDVPYVFKPFGNGQSNPNYDALVKMVADNEFDAVVGDIAIVTNRTRIVDFSQPFASTGLVIVAPIKNWKSSAWVFLKPFSADMWVVTAASFIMIGVVIWILEHRINDDFRGPPKRQIVTMCLFSLSTLFKTNKENTISSLSRMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNPEEYARALQLGPSRGGVGAIIDELPYIELFLSTQTDFGIIGHPFTKSSWGFAFQRESPLALDMSTAILKLNENGELQKIRERWFCKMDCPEERRSHSEPNKLHLISFWGLYLSCGIITLASLLVFLLRTIRQYMRYKQKQKENNPSGSREASGGKCSQVIYSFFNFIDEKEEAIKKMFTQCDENPEIQQPT 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1006 882 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 26 839 - -
Lele11g1006 882 FunFam Glutamate receptor 577 696 - -
Lele11g1006 882 Gene3D - 44 393 - -
Lele11g1006 882 Gene3D - 578 698 - -
Lele11g1006 882 SUPERFAMILY Periplasmic binding protein-like II 443 775 - -
Lele11g1006 882 Pfam Receptor family ligand binding region 43 403 IPR001828 -
Lele11g1006 882 FunFam Glutamate receptor 461 577 - -
Lele11g1006 882 Pfam Bacterial extracellular solute-binding proteins, family 3 467 775 IPR001638 -
Lele11g1006 882 CDD PBP1_GABAb_receptor_plant 27 423 IPR044440 -
Lele11g1006 882 FunFam Glutamate receptor 141 302 - -
Lele11g1006 882 Pfam Ligand-gated ion channel 776 806 IPR001320 GO:0015276|GO:0016020
Lele11g1006 882 Gene3D - 463 577 - -
Lele11g1006 882 SMART GluR_14 465 777 IPR001320 GO:0015276|GO:0016020
Lele11g1006 882 Gene3D - 141 418 - -
Lele11g1006 882 Gene3D - 723 782 - -
Lele11g1006 882 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lele11g1006 882 SUPERFAMILY Periplasmic binding protein-like I 19 458 IPR028082 -
Lele11g1006 882 FunFam Glutamate receptor 741 774 - -
Lele11g1006 882 PIRSF IGluLR_plant 689 882 IPR017103 -
Lele11g1006 882 PIRSF IGluLR_plant 2 693 IPR017103 -
Lele11g1006 882 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 314 326 - -
Lele11g1006 882 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 99 127 - -
Lele11g1006 882 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 39 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1006 Lele-ChrLele11 17154152 17158370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1006 20 882 Ion Channels AT2G32400 54.033 0.0 972