Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1005 ATGGCTGTGGCTCCAACGTTATTCCTTCTGGTTTTCTGGTTATGGATTTCCTCAGAAGCTGTGGGAAGAACAGGAAATAGTACCATGACAAATAATAGTACTGTCCCTTCAAGACCGAACGTTGTGAGAATTGGAGCCCTGTTTACGTTTGATTCTGTCATTGGAAGATCTGCTAAACCTGCAATTTTGGCTGCTGTTTATGACGTCAATTCTGATACAAGCATTCTCGGCGGCATAAAGCTTGAAGTTATTTTACATGATACCAACTGCAGTGGATTTCTTGGAACCGTAGAAGCTTTGCAGTTAATGGAGAATGATGTGGTTGCTGTTATTGGTCCACAATCTTCTGGGATAGCTCATGTGATCTCTCATGTTGTTAATGAACTTCATGTACCTCTTCTCTCATTCGGGGCGACCGATCCTACTCTTTCTTCTCTGCAGTACCCTTATTTCATCCGAACTACGCAAAATGATCATTTCCAGATGTATGCAGTAGCAGACTTGGTAGAATATTACGGATGGAGAGAAGTAATCGCCATTTTTGTTGATGATGATAATGGAAGAAATGGGGTTTCTGTATTGGGCGATGCGCTAGCGAAGAAACGTGCCGGGATCTCATACAAGGCCGCTTTCCCTCCAGATGCTTCCAGAACTGCCATTAATGAGCTGTTAAATGAAGTGAATTTAATGGAATCACGGGTTTATGTTCTTCATGTGAATCCTGATTCAGGATTGGCCATTTTTTATCTTGCGAAAAAGCTTGGCATGATGACCAATGGCTATGTTTGGATTGCAACTGATTGGCTTCCTTCAGTTCTTGATTCACAATTCCCAGCAAGCCTTGAAACATTGAATCTTTTACAAGGAGTTGTCACATTTCGTAATCACGCTCCTTATACCGACACGAAGAACAATCTTCTCTCTAAGCTGAAAAAACTGAACAACAGTAAGATTTCAGGCTTCAATTCTTATGCTTTGTATGCATATGATTCTGTCATGCTTGCTGCTCATTCTCTGCATGATTTTCTCAATCATGGAGGAACCATATCTTTCTCCAATGACCCTAACTTGCATGACACTAATGGAAGTTTGTTGCATGTATCATCACTTAGAACTTTCAATGGTGGCCCCAAGTTTCTCCAGACAATCCTGAGAATGAATTTCACTGGTGTTAGTGGTCAAATTCAGTTTGATAAGGACAAGAACTTGATTCGACCGGCGTATGATATCGTAAACATCGGTGCATCGGGTCCTCGGATTATCGGTTATTGGTCTAATCACTCTGGTCTTACAGAGATAGCTCCTGAATATCTATACTCAAAATCATCAAACAAGTCTTCTGGCAATAATAAACGTTTGTACAATGTGATATGGCCAGGATTGACATCAATTACACCAAGAGGATGGGTTTTCCCTAATAATGGAAAACCACTGAGAATCGCAGTGCCGAATCGAGTAAGCTTCACAGAGTTTGTTGGCAAAGAAAAGGACCCTCCCGGCGTAAAAGGTTTTAGCATCGATGTCTTTGAAGCCGCGTTGAATTTATTGCCTTATCCTGTCCCTAAGCAATATATACTATTTGGACATGGTGATAGAAATCCTAATTATGATGATCTTGTGAATCAGGTTGCACAAAACAAATATGATGCTGCTGTTGGGGATGTTACTATTGTCACAAACAGAACAAGGATTGTGGATTTTACTCAACCTTACATGACTTCAGGGTTAGTTGTAGTTGTTCCTGTCAGAGAGGTAAACTCAAGCCCATGGTCATTTCTTAAGCCATTTACTGCACAAATGTGGTTTGTCACTGGTGCATTTTTCCTTTTCGTCGGAGCCGTCGTATGGATTCTTGAACACCGGCACAATCACGAGTTCCGAGGACGACCAAGGAAACAACTCATGACAATGTTCTGGTTTAGCTTCTCAACAATGTTTTTCTCACACAGAGAGAATACTGTGAGTGCTCTGGGGAGATTGGTGCTAATCATATGGCTTTTTGTGGTGCTCATTATCAATTCAAGCTACACAGCAAGCTTGACATCAATCCTCACAGTGCAGCAACTTTCATCACAAATTGAAGGCATTGACAGTTTGATCTCAAGCACTCAACCGATCGGAGTTCAAGACGGCTCATTCGCCCGGAAGTATCTCATCGATGAGCTCAACATGGCTGAAGCAAGAATCGTTATATTGAAAAATCTGCAGGACTATGTGGATGCCCTTACCCGTGGACCTAGAAATGGAGGTGTGGTAGCCGTTGTTGATGAGCTTCCTTATATTGAGCTCCTCATGTCCAGCACTAATTGTCAGTTCAGAACCGTAGGCCAAGAATTCACAAAAAGTGGGTGGGGATTTGCATTTCAGAGGGACTCACCACTTGCGGTGGACATGTCGACGGCGATTCTGCAACTATCAGAGAATGGCGACTTGCAGAAGATTCACGACAAGTGGTTATTAAAGAACGAATGTTCTGCAACACAGAACGATGATGAAGATTCAAACCAACTATCCCTGAGTAGCTTCTGGGGATTGTTCCTCATAATTGGGGTTGCTTGTCTTCTTGCTTTAATTGCTTTCTGTATAAGAGTGTTTTGTCAGTTCACTAAATTCTCACCAGCCATTGATGAGAAGGTCGACCAAGAAATACAACCTCGTATGCCGAAGACTAAACGGCCATGTCGAACTCCAAGTTTCAAGGACTTGCTCGAATTTGCTGATACAAGAGAAGCTGAAATCAAAGAGCAAATCAGGAAAAAGAGTAATAAACGTGGACGCCCACGAAGCTTTGAGATCTAA 2799 0.4205 MAVAPTLFLLVFWLWISSEAVGRTGNSTMTNNSTVPSRPNVVRIGALFTFDSVIGRSAKPAILAAVYDVNSDTSILGGIKLEVILHDTNCSGFLGTVEALQLMENDVVAVIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSSLQYPYFIRTTQNDHFQMYAVADLVEYYGWREVIAIFVDDDNGRNGVSVLGDALAKKRAGISYKAAFPPDASRTAINELLNEVNLMESRVYVLHVNPDSGLAIFYLAKKLGMMTNGYVWIATDWLPSVLDSQFPASLETLNLLQGVVTFRNHAPYTDTKNNLLSKLKKLNNSKISGFNSYALYAYDSVMLAAHSLHDFLNHGGTISFSNDPNLHDTNGSLLHVSSLRTFNGGPKFLQTILRMNFTGVSGQIQFDKDKNLIRPAYDIVNIGASGPRIIGYWSNHSGLTEIAPEYLYSKSSNKSSGNNKRLYNVIWPGLTSITPRGWVFPNNGKPLRIAVPNRVSFTEFVGKEKDPPGVKGFSIDVFEAALNLLPYPVPKQYILFGHGDRNPNYDDLVNQVAQNKYDAAVGDVTIVTNRTRIVDFTQPYMTSGLVVVVPVREVNSSPWSFLKPFTAQMWFVTGAFFLFVGAVVWILEHRHNHEFRGRPRKQLMTMFWFSFSTMFFSHRENTVSALGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGVQDGSFARKYLIDELNMAEARIVILKNLQDYVDALTRGPRNGGVVAVVDELPYIELLMSSTNCQFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLLKNECSATQNDDEDSNQLSLSSFWGLFLIIGVACLLALIAFCIRVFCQFTKFSPAIDEKVDQEIQPRMPKTKRPCRTPSFKDLLEFADTREAEIKEQIRKKSNKRGRPRSFEI 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1005 932 Pfam Bacterial extracellular solute-binding proteins, family 3 500 820 IPR001638 -
Lele11g1005 932 Gene3D - 712 823 - -
Lele11g1005 932 Gene3D - 61 405 - -
Lele11g1005 932 SUPERFAMILY Periplasmic binding protein-like I 37 469 IPR028082 -
Lele11g1005 932 CDD GluR_Plant 476 819 - -
Lele11g1005 932 Pfam Ligand-gated ion channel 821 853 IPR001320 GO:0015276|GO:0016020
Lele11g1005 932 Pfam Receptor family ligand binding region 59 413 IPR001828 -
Lele11g1005 932 Gene3D - 589 711 - -
Lele11g1005 932 FunFam Glutamate receptor 473 589 - -
Lele11g1005 932 SUPERFAMILY Periplasmic binding protein-like II 455 822 - -
Lele11g1005 932 Gene3D - 473 588 - -
Lele11g1005 932 SMART GluR_14 479 821 IPR001320 GO:0015276|GO:0016020
Lele11g1005 932 FunFam Glutamate receptor 157 325 - -
Lele11g1005 932 Gene3D - 157 430 - -
Lele11g1005 932 FunFam Glutamate receptor 589 719 - -
Lele11g1005 932 PIRSF IGluLR_plant 1 931 IPR017103 -
Lele11g1005 932 CDD PBP1_GABAb_receptor_plant 43 432 IPR044440 -
Lele11g1005 932 FunFam Glutamate receptor 715 823 - -
Lele11g1005 932 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1005 Lele-ChrLele11 17146008 17149913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1005 38 786 Ion Channels AT1G05200 66.622 0.0 1063