Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0997 ATGGTGGAACGGAAGCAGTTCAAGACCAGGCTATGTGTACCATATGAGAAAGGCCGCTGCCCCCGCCAAAATTGCACCTTTGCTCATGGGAATGCGGAGCTGCGGCGATTCTCTGGCTCATATAGTGGTAGGCAAGACTATTCAGGTACTGACTTGAGAGGAAAACTTGAAAGAAGACACTTATCACCTCGCAGGTTTTCACCAGCAAGAGATGCAAGGAGCCACCAAAACATTCATGATTACAGCCCTGGGAGGTCCTTGGAGAGAAGAAGTGATAGGAAACGCAAGAGAGATAAGGGCATTGCAGGCCAAAGTGATGTTTCTGGAAGCTTGAGATTCTCTGATAGAATCCAAGATAAAGAAGGAAAACTGCATTCCTCTGGTTCAAAAAATAGTCTTGAGGAGAAGCTGAAGAAAGTACAGTCAGAAATCAACATGCTTGATCAGCAAAAGTTTCAACTTGGGGTCTACTTGGATGAGAGTGTTCAAGAAGTGGATAGCCTCAATTCTAGAATTCTGGAACTTCAGGCTCAATTGTTTAAAGAGAATGAAGAATGTAAAAGGGTCACGTCAAAAATAAGGAAGTTTATTAAAGCACATAATCATAACACTCGATTACAAGATGAATTGAAGAGATCACAGGCTCGACTTCAAAGGTTGGGAGATCAGCTTGACTCGGACATTGCTAGAATTGGTGTCAATGAAGAAGACTTGAGTATTGATATTGTAAGCAATGCTGAGGACGTAGGTTTTCCATCCACCATCAAAGATAATGTGGAGCAGAATGATGCTTCTCCACACAGAAAAAGGCTGCCTGTTGGCCATGATGCTGTTGAAGACACAAAACAAGCCAGAACCAGGAAGCGTTCTCGGTGGAATTTGGCTGCTGAGTCAAATGATAAGGCTTATGAGGGCCCTGAGGCCCCAAATAATGGGACTCAAGCGACTAAGTCCCATAATATTGAAGGCAGGCCAAAGAAAGGACCATATGGTTCTTCTGGCAGCCTCAACTTAGAAAAGTTGAAGGAAAGTAGGATTGGTGTGCCATTAACCAGCATGGCAGCTCATGTGGTTGATGAGGAAGTTGAGATTGAGCTTGATGATAACATTGAGAAAACTGAAACTGCACCTGAAGAAAATGAGAATGAAAAGGTGAGGAGTTTACCAATGCTTCCCCCAACTCTGACTTCTTCTGGGACGAATTATTCACAGTATGAGGGTGATGATGACAATGTGGCTGTGGATGGGTATGATGAAGAAGCAGAAATTGCACAAATGGATATGGTCTGA 1290 0.4349 MVERKQFKTRLCVPYEKGRCPRQNCTFAHGNAELRRFSGSYSGRQDYSGTDLRGKLERRHLSPRRFSPARDARSHQNIHDYSPGRSLERRSDRKRKRDKGIAGQSDVSGSLRFSDRIQDKEGKLHSSGSKNSLEEKLKKVQSEINMLDQQKFQLGVYLDESVQEVDSLNSRILELQAQLFKENEECKRVTSKIRKFIKAHNHNTRLQDELKRSQARLQRLGDQLDSDIARIGVNEEDLSIDIVSNAEDVGFPSTIKDNVEQNDASPHRKRLPVGHDAVEDTKQARTRKRSRWNLAAESNDKAYEGPEAPNNGTQATKSHNIEGRPKKGPYGSSGSLNLEKLKESRIGVPLTSMAAHVVDEEVEIELDDNIEKTETAPEENENEKVRSLPMLPPTLTSSGTNYSQYEGDDDNVAVDGYDEEAEIAQMDMV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0997 429 MobiDBLite consensus disorder prediction 256 333 - -
Lele11g0997 429 Coils Coil 158 185 - -
Lele11g0997 429 MobiDBLite consensus disorder prediction 372 412 - -
Lele11g0997 429 Coils Coil 203 223 - -
Lele11g0997 429 MobiDBLite consensus disorder prediction 261 295 - -
Lele11g0997 429 Coils Coil 130 150 - -
Lele11g0997 429 Gene3D - 1 36 - -
Lele11g0997 429 SUPERFAMILY Troponin coil-coiled subunits 123 195 IPR038077 -
Lele11g0997 429 MobiDBLite consensus disorder prediction 60 102 - -
Lele11g0997 429 MobiDBLite consensus disorder prediction 391 407 - -
Lele11g0997 429 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 416 IPR045868 GO:0046872
Lele11g0997 429 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Lele11g0997 429 MobiDBLite consensus disorder prediction 60 131 - -
Lele11g0997 429 MobiDBLite consensus disorder prediction 113 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0997 Lele-ChrLele11 16992637 16998042 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele11g0997 None None None