Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0996 ATGATAGCTTTTCTCACGACGAAGGTGTCCAATCTCTTGGCAATCTTGCTCCATACCATGGATTCACGCTCTATTGGGGCAGTTGCGGGTCTTGCTGTTGCAGTTTTCTTCACTTGGAGGCTATTGAGATCCCCTAGTGGATCTCAACGGGGTCAAAGGAAGCGACAAGCTACTGCAGCTGGTACTTCTGGTGTAAATACTCAATCTAGTGCCTCATTGACTGCAACTGGGGTTTCTTCACCGTTACATGTTTCAAGGGCCCAAAATGTTGTTGATGAGTTCTTTCAGCCTGTCAAGCCAACCTTGGGGCAGATAGTTCGGCAGAAGTTGAGTGAAGGAAGAAAGGTAACTTGTAGCCTTCTAGGAGTGATCCTTGAGGAAAGTAGTCCAGAGGAGCTTCAGAGACAAGCTACTGTGAGGTCCTCTGTGCTCGAAGTGTTGTTGGAGATAACTAAATTCTGTGATATATATCTCATGGAACGAGTTCTGGATGATGAAAGTGAGAAAAGAGTTCTTGTAGCATTGGAAGAGGCTGGGGTTTTTACTTCAGGTGGTCTGGTCAAGGACAAGGTCCTCTTCTGTAGCACAGAGAATGGACGATCATCATTTGTTCGGCAGTTGGAGCCTGATTGGCATATCGACACAAATCCAGAAGTTGTCTCTCAAACCCTGTGCTTCTCCCGTTCATCTCTGAGAATGGAGTCCATTTGCCCAATAGACTCGCGGTGTGCAAATGAAATTGCAGCACTTCTCAGTCCTCCGTCACCTCTTCAAGTTCAGTTCTGTTCGTTTCTTCTCCAGGAATATTATCATAAGCTTTTATCTACAAGGAAGTGCAGTAGTATCATAGTCAAACAGGACGGAAATTATGGAAAGGGTGTGTATGCTGCTGTGGACTTCAATGAAGGGGAGCTTGTCCTAAAAGATCCAATGCTAGTTGGGGTCCAACACTCTTCCAACAAGATCGACTGTTTTGTCTGTAACTCTTGCTTTCGTTTTATTGGTTCTATAGAACTTCAAATTGGAAGGAGGCTTTACTTGCAAGAATTAGGGGCTTCTGAGAGTCATGATTGTGATGTGAATAACTCTTCAAACATACCAAAACACCACAATGATGATACAGATTCATCTGATGGAGAAGACAATTCATATAAAAGAAAGAACGATGGTGCTGAGGAATGTAGTTTTGGCAGTTCTGAAGCTAAAGTTCATCTACCAGAAGGTGTTGTTCAATCATTACTGAATGGCCATATGATGCTGCCTTACTCTAAGGAGTTCTCCTTGCCACCAGCTGTCCCATGCCCTGGTGGATGTGGAGAGTCATTCTACTGCAGCATATCATGTGCGGAGGCTGATTGGGAATCTTGTCATTCTTTGATTTGTACCAGTGAGAGGTCTGATACATCACGTAGGGAGGCACTTCTAAAATTCGTTAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCTGCAAAGGCTATTTCTTCCACCATATTAAGGTACCAAAAGTTAAAAGAAAGCTGTCTTTTAGGGAAAGGTAAACATGATACATCACATCTTTCAAACCATTATGGTCCCACTACTCTTTTGGAGGCTTGGAGACCTATAGCAATGGGACACAAGAGAAGGTGGTGGGACTGCATTGCATTGCCAGATGATGTTAATTCTTCTGATGAAGTTTCATTCAGGATGCAAATAAGAGATTTGGCATTTGAGTCACTCCAACTTCTAAAGACAGCTATATTTGACAGAGAGTGTGAACCATGTATCCTTCCTAATGCTAAATTGATGATCTTATTCTCCCTGGAAATTTATGGGCACATCATTGGCATGTTTGAGCAAAATAATCTTGGTTTGGTGGTAGCCTCTCCTGTGGAGGATTACTTTTTATACATTGACGATCTAAAATATCCTGAAAAGGAAAAAGCTGAGGAAATTACACAACCAATTCTGGATGCTCTCGGCGAAGACTATTCCATTTGTTGCCAGGGAACTGCATTTTTTCCATTGCAAAGCTGCATGAACCATTCCTGCTATCCTAATGCAAAGGCGTTCAAAAGAGAGGAGGATAGAGATGGTCAAGCAACGATAATTGCACTAAGGTCTATTCGTAAAGGAGAAGAGATAACTATCTCATATGTGGATGAGGATCTTCCATTTGAAGAGAGACAGGCATGTCTTGCAGATTATGGTTTCAGATGTAGGTGCCCAAAGTGCGTTGAAGAACAACCATAGATTTCGATCCTTCGGTCTTCAGTTGGGTTTCTCAAGGGAGCTATTCAATTTGGAGCCGCACACTCGACTCTTCGAGTTCTAAGGAATCTTGATATTAACTTTTCATCACAAGCCTGA 2355 0.4255 MIAFLTTKVSNLLAILLHTMDSRSIGAVAGLAVAVFFTWRLLRSPSGSQRGQRKRQATAAGTSGVNTQSSASLTATGVSSPLHVSRAQNVVDEFFQPVKPTLGQIVRQKLSEGRKVTCSLLGVILEESSPEELQRQATVRSSVLEVLLEITKFCDIYLMERVLDDESEKRVLVALEEAGVFTSGGLVKDKVLFCSTENGRSSFVRQLEPDWHIDTNPEVVSQTLCFSRSSLRMESICPIDSRCANEIAALLSPPSPLQVQFCSFLLQEYYHKLLSTRKCSSIIVKQDGNYGKGVYAAVDFNEGELVLKDPMLVGVQHSSNKIDCFVCNSCFRFIGSIELQIGRRLYLQELGASESHDCDVNNSSNIPKHHNDDTDSSDGEDNSYKRKNDGAEECSFGSSEAKVHLPEGVVQSLLNGHMMLPYSKEFSLPPAVPCPGGCGESFYCSISCAEADWESCHSLICTSERSDTSRREALLKFVKHANETNDIFLLAAKAISSTILRYQKLKESCLLGKGKHDTSHLSNHYGPTTLLEAWRPIAMGHKRRWWDCIALPDDVNSSDEVSFRMQIRDLAFESLQLLKTAIFDRECEPCILPNAKLMILFSLEIYGHIIGMFEQNNLGLVVASPVEDYFLYIDDLKYPEKEKAEEITQPILDALGEDYSICCQGTAFFPLQSCMNHSCYPNAKAFKREEDRDGQATIIALRSIRKGEEITISYVDEDLPFEERQACLADYGFRCRCPKCVEEQPXISILRSSVGFLKGAIQFGAAHSTLRVLRNLDINFSSQA 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0996 784 Gene3D SET domain 635 745 IPR046341 -
Lele11g0996 784 MobiDBLite consensus disorder prediction 358 393 - -
Lele11g0996 784 ProSiteProfiles SET domain profile. 280 715 IPR001214 GO:0005515
Lele11g0996 784 Pfam SET domain 654 714 IPR001214 GO:0005515
Lele11g0996 784 SMART set_7 280 721 IPR001214 GO:0005515
Lele11g0996 784 MobiDBLite consensus disorder prediction 48 70 - -
Lele11g0996 784 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 246 744 IPR044237 GO:0008168
Lele11g0996 784 SUPERFAMILY SET domain 260 740 IPR046341 -
Lele11g0996 784 MobiDBLite consensus disorder prediction 366 393 - -
Lele11g0996 784 CDD SET_SMYD 654 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0996 Lele-ChrLele11 16978424 16992574 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele11g0996 SET 1e-11 No_clan