Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0994 ATGGATCCTGTACCTGTATGTGAGTTATGTGTAGTGTCAAGAGCTGTGGTGTATTGCAAGTGTGATTCTGCGCGTCTCTGCTTGAATTGTGATGCATATGTACACTCGGCGAATGCTTTGTCTCGCCGGCATCCTCGTACGCTGGTGTGTGATAAATGCCATTGTCAACCAGCGATTGTCCACTACATGGATGATAAAATGTCAATGTGTCAAAGTTGTGATTGTAATCGAAATGTTTGTTTGGGATTGGGACACAGGCGTATGATGTTGCTTAGTTACACAGGTTGTCCTTCTTTTGCTGACATGTGTAGGATCTGGCCTTTTGCTTTTGATTCTACTACCTCACCTTCTGCTGGTTTAGCTCATAGTTGGGGATCGTTTAATGCTTTGCCTAAGAACGAAAGCCAGTGTTTGGCTCATCAGCTTGATGATCAAAATGATTCATCCTTCCCTGGCAAGTTCAGTGAATTTGGATCTTGTACAAAGTATGAACCTAAGATGGCTCAGTCTTCTCTCATTCAACCAAATCCCAATTTCATTCCCTATTGCAGAGATCAACCGGTTTTATTTCCCCAAGCTTCCAACCTCCTGCCAAAGGGATGTCATGATTCTGAGGAAATGGGAATTTCAGAGGCTGATGATTTCTGTGAAGGTCTTAACATGGACAGGGTTCAATTAAGCTTTGGGGGTGCTAATGAAATATTTGATTGCTCTCCAGATGTTGCTGATTACCAGCTTGAGGAAGGAGGATTGGATTGTCTATTAATAGAAAAAAACATATCATTCACAGAATCTAATGGCCTTATTCATAATGCCATGGAGGCATCATCATCAGTGCAGCGAGGTTCTATGATCCAGGGGATGAACAACAGCAACAATGCAAACTGTGTGCTCATGAATAATAATAATAATACTAGCTGCAACAACAGAAAAATGAATCATCATCAGATGGGATTTCCTCCTCAGGGTCAAGTTCATTCAAGCATACCAATTTCATTACCCCCCCTCAATTGTGATAGTGACACTACCACTACGGATTTTCAGGATTGTGCCACTTCTGAATTTCAAGACTCTGGATTATCCCCAGCACTTTTGACCGTTGATACAACACCATGGGAATCAAATTTAGTATCTACATGCCCACAAGCAAGGGAGAAAGCTAAGTTGAGATACATAGAGAAAAAGAAGATTCGAACGTTTAGTAAACAAATAAGATACGCGTCTCGCAAAGCAAGAGCTGATACTAGAAAACGTGTCAAAGGTAGATTTGTGAAAGCAGAAGAAGAATATGATTTTGATCCTGATCTTGTGACAGGGAACTGTTAA 1326 0.4118 MDPVPVCELCVVSRAVVYCKCDSARLCLNCDAYVHSANALSRRHPRTLVCDKCHCQPAIVHYMDDKMSMCQSCDCNRNVCLGLGHRRMMLLSYTGCPSFADMCRIWPFAFDSTTSPSAGLAHSWGSFNALPKNESQCLAHQLDDQNDSSFPGKFSEFGSCTKYEPKMAQSSLIQPNPNFIPYCRDQPVLFPQASNLLPKGCHDSEEMGISEADDFCEGLNMDRVQLSFGGANEIFDCSPDVADYQLEEGGLDCLLIEKNISFTESNGLIHNAMEASSSVQRGSMIQGMNNSNNANCVLMNNNNNTSCNNRKMNHHQMGFPPQGQVHSSIPISLPPLNCDSDTTTTDFQDCATSEFQDSGLSPALLTVDTTPWESNLVSTCPQAREKAKLRYIEKKKIRTFSKQIRYASRKARADTRKRVKGRFVKAEEEYDFDPDLVTGNC 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0994 441 ProSiteProfiles Zinc finger B-box type profile. 2 49 IPR000315 GO:0008270
Lele11g0994 441 Pfam CCT motif 384 426 IPR010402 GO:0005515
Lele11g0994 441 ProSiteProfiles CCT domain profile. 384 426 IPR010402 GO:0005515
Lele11g0994 441 SMART bboxneu5 2 49 IPR000315 GO:0008270
Lele11g0994 441 CDD Bbox1_BBX-like 6 49 - -
Lele11g0994 441 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0994 Lele-ChrLele11 16908134 16910540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0994 5 440 C2C2-CO-like Transcription Factor Family AT3G21880 37.188 5.87e-79 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele11g0994 CCT 4.6e-15 CL0281