Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0980 ATGCGGAAGTTACTCCCGGCAATCTTCGCGTGGCTCTCTCAGGTCCAAATCCAGAATCCCCAGACATCCTCGTTAACCATTGAACATAACGACGGCGAATGTAACAAAGAGACGCCTTCGGAGTCAACGCTCCTGGCTCCATCCCTCAAACACAGGAGCACAACTTGCATGCAGAAATTAGAGAAAGGCCATACTAAAGGGGATGGATCCAAGTCCCTGGCAGAGAAGCTGGCGAGATGGAAAGAGTATAATGCGCAGCTTGATTCTTGCGGTGATGCAGATAAGCCAATTCGGAAAGTTCCTGCCAAAGGATCAAAGAAGGGATGCATGAAAGGCAAAGGAGGGCCTGAGAATTCTCGTTGTAACTACCGGGGAGTGAGGCAGAGGACATGGGGCAAGTGGGTGGCCGAAATTCGAGAGCCGAACAGAGGAAGTAGGCTCTGGTTGGGTACATTTCCTACTGCCATTGGAGCTGCTCTTGCATATGATGAAGCAGCAAGAGCAATGTATGGTTCTTTCGCTCGCCTCAACTTTCCAAATGTTTCGGTCTCCAATTTCTCTAATGAATCTTCAAGAGATTCACTAGTTGCAACTCAATCTGATTCTGCAGTGCCAACTGAATCTACGCTGTCCCCAACCAACTCTGGCTTTGGCGAGTTAGATAATACCGACAAGAAACGGGTTCCTTTGAATGTAAAAGTTGAGGAAGGGGAAGTTGAACTGAGGATCAATTCGTCGTCGCTTTCATGA 750 0.4827 MRKLLPAIFAWLSQVQIQNPQTSSLTIEHNDGECNKETPSESTLLAPSLKHRSTTCMQKLEKGHTKGDGSKSLAEKLARWKEYNAQLDSCGDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIGAALAYDEAARAMYGSFARLNFPNVSVSNFSNESSRDSLVATQSDSAVPTESTLSPTNSGFGELDNTDKKRVPLNVKVEEGEVELRINSSSLS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0980 249 CDD AP2 121 181 IPR001471 GO:0003700|GO:0006355
Lele11g0980 249 FunFam Ethylene-responsive transcription factor 2 121 180 - -
Lele11g0980 249 ProSiteProfiles AP2/ERF domain profile. 122 179 IPR001471 GO:0003700|GO:0006355
Lele11g0980 249 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Lele11g0980 249 PRINTS Ethylene responsive element binding protein signature 145 161 IPR001471 GO:0003700|GO:0006355
Lele11g0980 249 Gene3D AP2/ERF domain 122 181 IPR036955 GO:0003700|GO:0006355
Lele11g0980 249 MobiDBLite consensus disorder prediction 194 231 - -
Lele11g0980 249 Pfam AP2 domain 121 171 IPR001471 GO:0003700|GO:0006355
Lele11g0980 249 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 60 213 - -
Lele11g0980 249 MobiDBLite consensus disorder prediction 96 117 - -
Lele11g0980 249 MobiDBLite consensus disorder prediction 194 219 - -
Lele11g0980 249 SUPERFAMILY DNA-binding domain 122 179 IPR016177 GO:0003677
Lele11g0980 249 SMART rav1_2 122 185 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0980 Lele-ChrLele11 16722798 16724810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0980 66 220 AP2-EREBP Transcription Factor Family AT2G40340 54.819 1.45e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele11g0980 AP2 3.1e-14 CL0081