Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0967 ATGGTGAGAACTCCAGGCTGCGATAAAAGTGGACTGAAGAAAGGAACATGGACACCAGAAGAAGATAGGAAGCTAATTGCTTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTTCCCAAGTATGCAGGCCTTGCAAGATGTGGAAAGAGTTGCAGACTTCGATGGCTAAATTACCTGAGGCCCAACATCAAAAGAGGAAATTACACTCCTGAAGAAGAACAAATCATTATCCAGCTGCACCAAGAACTCGGAAACAGATGGTCGGCGATTGCTGCGAAGCTGCCGGGAAGAACAGACAATGACATAAAGAACTACTGGCACACGAATCTCAAGAAGAAGATTCAAGACAAGAAGTCGGGAAAACAGGCCCGAGTTGAAGATAAGCAGTCATCATCATCAAGTGAAATGGAAGTTAACAATAATACTACTGATGCTTGTGATAATAATCACATGACAGCGGATTCAAGTCGCGGGCCGTCGCCGGATCAGTCATCGTCGAGATACTCGACGGAGACCACGGCAGGAGGAGGCAGCAACGAATCAAGTTCGATAGTGGAAGATGATCATGATAAGTTTGCTTTTCTGAATGCATTGCCAGACGTAAATTTCTGGACAGACCCTTATGTGGCTGACATTTTCTGTGACCCTACAGAAGCAGGATCACCATTCCCATCCTTGTTAATTGATCAATCCGATTATTTTACTGTTGATCCATCGTGTGATGTACTGCTTTGGAGTTGGACTCAAAATAACGTTTACGACCAATATCCTGGCTTATTCGCATGA 792 0.4457 MVRTPGCDKSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPKYAGLARCGKSCRLRWLNYLRPNIKRGNYTPEEEQIIIQLHQELGNRWSAIAAKLPGRTDNDIKNYWHTNLKKKIQDKKSGKQARVEDKQSSSSSEMEVNNNTTDACDNNHMTADSSRGPSPDQSSSRYSTETTAGGGSNESSSIVEDDHDKFAFLNALPDVNFWTDPYVADIFCDPTEAGSPFPSLLIDQSDYFTVDPSCDVLLWSWTQNNVYDQYPGLFA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0967 263 SMART sant 66 114 IPR001005 -
Lele11g0967 263 SMART sant 13 63 IPR001005 -
Lele11g0967 263 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 174 - -
Lele11g0967 263 Gene3D - 69 144 - -
Lele11g0967 263 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele11g0967 263 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele11g0967 263 MobiDBLite consensus disorder prediction 115 185 - -
Lele11g0967 263 MobiDBLite consensus disorder prediction 115 133 - -
Lele11g0967 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele11g0967 263 MobiDBLite consensus disorder prediction 134 184 - -
Lele11g0967 263 FunFam Transcription factor RAX3 7 67 - -
Lele11g0967 263 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele11g0967 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele11g0967 263 CDD SANT 16 61 IPR001005 -
Lele11g0967 263 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele11g0967 263 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele11g0967 263 CDD SANT 69 112 IPR001005 -
Lele11g0967 263 Gene3D - 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0967 Lele-ChrLele11 16555935 16556972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0967 1 213 MYB Transcription Factor Family AT2G31180 48.598 4.15e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele11g0967 Myb_DNA-binding 1e-13 CL0123