Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0965 ATGGCAATGATAATTCGAGCGTTGCTTATTCTGGGATTCATGTCGGTTCAGATTCATTTGGTCTTCTCTTTCACTGATCCTCAAGATGTTTCTGTATTGAGATCTTTAAAGGATATGTGGCAAAACGCACCACCCAGTTGGGATAAATCAGATGACCCCTGTGGAGCACCTTGGGAAGGACTCACCTGCAACAGATCCAGAGTCACTTCACTGGGATTGTCAACTATGGGCCTCCAAGGCAAATTAAGTGGAGACATTGGAGGTCTCACTGAATTGAGATCCTTGGACTTGTCGTTTAACAGAGGTTTGAAGGGTCCTGTGTCTCCACAATTAGGAGACCTAAGAAACCTAAATATATTGATTTTGGCTGGCTGCAGCTTCAGTGGTAAAATTCCAAATGAATTGGGAAATCTCTCGGAACTATCTTTCTTGGCATTAAATTCAAATAACTTATCTGGAGAAATACCAGCTTCATTGGGTAATCTTTCCAAATTATATTGGTTAGATTTAGCAGATAATCAATTGACAGGATCTATTCCTGTATCTACTTCTACATCTCCTGGACTAAATATGCTTTTAAAGGCCAAGCACTTCCATTTCAACAAGAACCAGCTTTCAGGTTCTATTCCACCAAACCTTTTCAGCTCTGAGATGGTACTCATCCATGTGTTGTTTGATGGGAATCGTTTAACAGGCACAATTCCATCAACAATAGGATTAGTTCAAACACTTGAAGTTCTTCGGCTTGATAGAAATTTCTTGACGGGAGAAGTCCCTTCAAATCTCAACAACCTAACCAACCTCAATGAATTGAATCTGGCACATAATAAATTGACAAGTTCTTTACCAGATTTGTCTCAGATGGATACCCTCAATTACGTGGATATGAGTAACAATTCTTTTGATCCTTCTCAACCCCCAGTATGGTTCTATACTTTACCATCACTTACCACTATAGTGGTGGAGTTTGGATCACTTGAAGGTCCTTTGCCATCAAAACTGTTCAGCAGCCCCCAAATACAGCAAGTGAAATTAAAGCACAATGCATTGAACAAAACTTTGGACATGGGTGACAGCATTAGCCCTCAATTACAGCTTGTAGATTTACAAGACAACCAGATTACTTCAGTAACACTCAGTTCTGGATACAAAAATACATTGATTTTGATTGGAAATCCAGTATGCCTTACTGCACTCTCAAATACTAATTACTGTCAACTACAGCAACAACCCATAAAACCTTACTCTACCAGCTTGGCTAATTGTGGAAGCAAATCTTGTCCTGCTGATCAGAAGTTAAGCCCACAAAGTTGTGAATGTGCCTACCCATACGAAGGAATTTTATATTTCAGAGGACCCTTGTTTAGAGAATTATCAAATGCAAATACATTTCATTCTCTTGAGATGAGCTTGTGGGTGAAGTTGGGCCTAACTCCTGGTTCAGTATCTTTACAGAACCCATTTTTCAACAGTGATGATTATCTTCAAGTGCAATTAGCACTCTTCCCACCAACAGGAACATACTTCAATAGGTCAGATATTCAGAGAATTGGATTTCAATTAAGTAACCAAACTTACAAGCCACCACCAGAGTTTGGACCATATTACTTCATCGCATTTCCTTATGCTTTCCTAGAATCCCGTGGAGCAACTTCTCTAAGCAAGCTTGTTATCATCGGGATAGCAATTGGCTGCTCATTTCTTGTTTTGAGCCTCGTAGGGCTTGGGATATATGCCATTATACAAAAGAAACGTGCAGAGAAAGCAATTGGGCTAAGCAGGCCATTTGCATCATGGACTCCTAGTGGGAAGGATAGTGGGGGAGCTCCACAACTAAAAGGAGCAAGATGGTTCTCTTACGATGAACTCAAAAAGTGCACCTCATATTTCTCCCATAATAATGAGTTAGGATTTGGAGGTTATGGCAAGGTGTACAAAGGGGTACTTCCTGATGGACAAATGATTGCAATAAAACGAGCCCAACAAGGATCAATGCAAGGAGGACTTGAGTTCAAGACTGAAATTGAATTGCTTTCACGAGTTCATCACAAGAATCTTGTTGCTCTTGTAGGCTTCTGCTTTGAACAAGGAGAGCAAATGTTGGTCTATGAATATATGCCCAATGGAACACTCAGGGATTGTTTATCTGGGAGATGTGGGATTTATCTAGACTGGAAGAGGAGGTTAAGAATTGCTCTGGGGTCAGCAAGAGGACTTGCATACTTACATGAACTCGCTAACCCTCCCATAATTCATAGAGATGTCAAGTCCTCTAATATCTTGCTAGATGAGAATTTGACGGCAAAAGTTGCAGATTTTGGCTTATCAAAGTTAGCATCAGATAGTGGAAAAGGCCATGTTTCTACTCAGGTTAAAGGCACATTGGGATATCTTGATCCTGAATATTACATGACACAACAATTGACCGAGAAGAGTGATGTGTATAGTTTTGGCGTCGTGATGCTTGAACTCATAACTGCTAGGCAACCTATTGAGAAAGGAAAATACATTGTGCGTGAAGTGAGATCACTGATAAACAAGAATGAGAATGAGCAGCAAGAGTATGGTGGTTTAAGGGAACTCATGGATCCAGTAGTTATAGAAACTTGTAATCTTGGAGGGTTTCGTACATTCTTGGATCTCACAATGCAATGTGTTGAGGAATCAGCTTCTGATCGTCCAACAATGAGTGAAGTTGTGAAAGCTCTTGAAATCATTCTGCAAAATGATGGCTTGAACACAAATTCCACTTCTGCTTCCTCTTCTGCAACAGACTTTGCACTTTCTAAGACTTCTCTAACACATCCTTACATGGATACTTTCAGCAGAAAGGACGTTAACGAGACAAATGCCTTTCACTATAGTGGTGGCTACACACTTCCTGCAAAAATTGAGCCCAAATAG 2904 0.4029 MAMIIRALLILGFMSVQIHLVFSFTDPQDVSVLRSLKDMWQNAPPSWDKSDDPCGAPWEGLTCNRSRVTSLGLSTMGLQGKLSGDIGGLTELRSLDLSFNRGLKGPVSPQLGDLRNLNILILAGCSFSGKIPNELGNLSELSFLALNSNNLSGEIPASLGNLSKLYWLDLADNQLTGSIPVSTSTSPGLNMLLKAKHFHFNKNQLSGSIPPNLFSSEMVLIHVLFDGNRLTGTIPSTIGLVQTLEVLRLDRNFLTGEVPSNLNNLTNLNELNLAHNKLTSSLPDLSQMDTLNYVDMSNNSFDPSQPPVWFYTLPSLTTIVVEFGSLEGPLPSKLFSSPQIQQVKLKHNALNKTLDMGDSISPQLQLVDLQDNQITSVTLSSGYKNTLILIGNPVCLTALSNTNYCQLQQQPIKPYSTSLANCGSKSCPADQKLSPQSCECAYPYEGILYFRGPLFRELSNANTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPTGTYFNRSDIQRIGFQLSNQTYKPPPEFGPYYFIAFPYAFLESRGATSLSKLVIIGIAIGCSFLVLSLVGLGIYAIIQKKRAEKAIGLSRPFASWTPSGKDSGGAPQLKGARWFSYDELKKCTSYFSHNNELGFGGYGKVYKGVLPDGQMIAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVALVGFCFEQGEQMLVYEYMPNGTLRDCLSGRCGIYLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSSNILLDENLTAKVADFGLSKLASDSGKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITARQPIEKGKYIVREVRSLINKNENEQQEYGGLRELMDPVVIETCNLGGFRTFLDLTMQCVEESASDRPTMSEVVKALEIILQNDGLNTNSTSASSSATDFALSKTSLTHPYMDTFSRKDVNETNAFHYSGGYTLPAKIEPK 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0965 967 FunFam Predicted protein 187 408 - -
Lele11g0965 967 FunFam Leucine-rich repeat family protein 28 184 - -
Lele11g0965 967 Gene3D Ribonuclease Inhibitor 187 411 IPR032675 -
Lele11g0965 967 CDD STKc_IRAK 636 906 - -
Lele11g0965 967 PANTHER RECEPTOR-LIKE PROTEIN 55 34 907 - -
Lele11g0965 967 Coils Coil 841 861 - -
Lele11g0965 967 Gene3D Phosphorylase Kinase; domain 1 604 705 - -
Lele11g0965 967 Pfam Protein tyrosine and serine/threonine kinase 633 903 IPR001245 GO:0004672|GO:0006468
Lele11g0965 967 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 706 919 - -
Lele11g0965 967 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Lele11g0965 967 SUPERFAMILY L domain-like 46 405 - -
Lele11g0965 967 SUPERFAMILY Protein kinase-like (PK-like) 615 929 IPR011009 -
Lele11g0965 967 ProSiteProfiles Leucine-rich repeat profile. 267 289 IPR001611 GO:0005515
Lele11g0965 967 ProSiteProfiles Protein kinase domain profile. 630 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0965 967 Gene3D Transferase(Phosphotransferase) domain 1 706 928 - -
Lele11g0965 967 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Lele11g0965 967 FunFam Leucine-rich repeat protein kinase family protein 598 705 - -
Lele11g0965 967 SMART serkin_6 630 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0965 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0965 Lele-ChrLele11 16081897 16089419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0965 6 967 Receptor kinase-like Gene Family AT1G79620 70.624 0.0 1421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele11g0965 PK_Tyr_Ser-Thr 6e-47 CL0016